Protein–RNA interactions for Protein: Q9Y5U2

TSSC4, Protein TSSC4, humanhuman

Predicted RBP Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4Q9Y5U2 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TSSC4Q9Y5U2 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TSSC4Q9Y5U2 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC11.48□□□□□ -0.57
TSSC4Q9Y5U2 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TSSC4Q9Y5U2 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TSSC4Q9Y5U2 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
TSSC4Q9Y5U2 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC11.48□□□□□ -0.57
TSSC4Q9Y5U2 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC11.48□□□□□ -0.57
TSSC4Q9Y5U2 MSRA-203ENST00000441698 788 ntTSL 2 BASIC11.48□□□□□ -0.57
TSSC4Q9Y5U2 AC006335.1-201ENST00000445200 547 ntBASIC11.48□□□□□ -0.57
TSSC4Q9Y5U2 RN7SL769P-201ENST00000469386 295 ntBASIC11.48□□□□□ -0.57
TSSC4Q9Y5U2 RPL18P13-201ENST00000478088 569 ntBASIC11.48□□□□□ -0.57
TSSC4Q9Y5U2 AC125604.1-201ENST00000496255 707 ntBASIC11.48□□□□□ -0.57
TSSC4Q9Y5U2 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC11.48□□□□□ -0.57
TSSC4Q9Y5U2 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC11.48□□□□□ -0.57
TSSC4Q9Y5U2 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC11.48□□□□□ -0.57
TSSC4Q9Y5U2 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC11.48□□□□□ -0.57
TSSC4Q9Y5U2 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC11.48□□□□□ -0.57
TSSC4Q9Y5U2 COG4-212ENST00000564653 590 ntTSL 5 BASIC11.48□□□□□ -0.57
TSSC4Q9Y5U2 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
TSSC4Q9Y5U2 PCBP2-OT1-201ENST00000634357 590 ntBASIC11.48□□□□□ -0.57
TSSC4Q9Y5U2 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC11.48□□□□□ -0.57
TSSC4Q9Y5U2 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC11.48□□□□□ -0.57
TSSC4Q9Y5U2 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC11.48□□□□□ -0.57
TSSC4Q9Y5U2 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TSSC4Q9Y5U2 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
TSSC4Q9Y5U2 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TSSC4Q9Y5U2 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TSSC4Q9Y5U2 AL157791.1-201ENST00000553667 1699 ntBASIC11.48□□□□□ -0.57
TSSC4Q9Y5U2 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
TSSC4Q9Y5U2 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC11.48□□□□□ -0.57
TSSC4Q9Y5U2 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TSSC4Q9Y5U2 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TSSC4Q9Y5U2 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
TSSC4Q9Y5U2 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TSSC4Q9Y5U2 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC11.48□□□□□ -0.57
TSSC4Q9Y5U2 ZBED1P1-201ENST00000502364 1930 ntBASIC11.48□□□□□ -0.57
TSSC4Q9Y5U2 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC11.48□□□□□ -0.57
TSSC4Q9Y5U2 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TSSC4Q9Y5U2 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TSSC4Q9Y5U2 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TSSC4Q9Y5U2 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC11.48□□□□□ -0.57
TSSC4Q9Y5U2 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC11.48□□□□□ -0.57
TSSC4Q9Y5U2 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TSSC4Q9Y5U2 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TSSC4Q9Y5U2 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TSSC4Q9Y5U2 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TSSC4Q9Y5U2 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TSSC4Q9Y5U2 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
TSSC4Q9Y5U2 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
TSSC4Q9Y5U2 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
TSSC4Q9Y5U2 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TSSC4Q9Y5U2 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TSSC4Q9Y5U2 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
TSSC4Q9Y5U2 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TSSC4Q9Y5U2 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
TSSC4Q9Y5U2 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
TSSC4Q9Y5U2 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC11.47□□□□□ -0.57
TSSC4Q9Y5U2 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
TSSC4Q9Y5U2 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TSSC4Q9Y5U2 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
TSSC4Q9Y5U2 AC145098.2-201ENST00000623593 3026 ntBASIC11.47□□□□□ -0.57
TSSC4Q9Y5U2 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC11.47□□□□□ -0.57
TSSC4Q9Y5U2 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TSSC4Q9Y5U2 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC11.47□□□□□ -0.57
TSSC4Q9Y5U2 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
TSSC4Q9Y5U2 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC11.47□□□□□ -0.57
TSSC4Q9Y5U2 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
TSSC4Q9Y5U2 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC11.47□□□□□ -0.57
TSSC4Q9Y5U2 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
TSSC4Q9Y5U2 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
TSSC4Q9Y5U2 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC11.47□□□□□ -0.57
TSSC4Q9Y5U2 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
TSSC4Q9Y5U2 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
TSSC4Q9Y5U2 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
TSSC4Q9Y5U2 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC11.47□□□□□ -0.57
TSSC4Q9Y5U2 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
TSSC4Q9Y5U2 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC11.47□□□□□ -0.57
TSSC4Q9Y5U2 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC11.47□□□□□ -0.57
TSSC4Q9Y5U2 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TSSC4Q9Y5U2 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC11.47□□□□□ -0.57
TSSC4Q9Y5U2 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
TSSC4Q9Y5U2 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TSSC4Q9Y5U2 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
TSSC4Q9Y5U2 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TSSC4Q9Y5U2 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TSSC4Q9Y5U2 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TSSC4Q9Y5U2 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TSSC4Q9Y5U2 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TSSC4Q9Y5U2 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
TSSC4Q9Y5U2 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC11.47□□□□□ -0.57
TSSC4Q9Y5U2 SLC16A6P1-201ENST00000413214 1059 ntBASIC11.47□□□□□ -0.57
TSSC4Q9Y5U2 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC11.47□□□□□ -0.57
TSSC4Q9Y5U2 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC11.47□□□□□ -0.57
TSSC4Q9Y5U2 RN7SL720P-201ENST00000488178 304 ntBASIC11.47□□□□□ -0.57
TSSC4Q9Y5U2 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC11.47□□□□□ -0.57
TSSC4Q9Y5U2 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC11.47□□□□□ -0.57
TSSC4Q9Y5U2 AC090857.1-201ENST00000527400 390 ntBASIC11.47□□□□□ -0.57
TSSC4Q9Y5U2 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC11.47□□□□□ -0.57
TSSC4Q9Y5U2 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC11.47□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms