Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 HNRNPA1P27-201ENST00000412087 955 ntBASIC16.25■□□□□ 0.19
COL4A3BPQ9Y5P4 DEF8-202ENST00000418391 852 ntTSL 2 BASIC16.25■□□□□ 0.19
COL4A3BPQ9Y5P4 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC16.25■□□□□ 0.19
COL4A3BPQ9Y5P4 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC16.25■□□□□ 0.19
COL4A3BPQ9Y5P4 OARD1-204ENST00000464633 717 ntTSL 2 BASIC16.25■□□□□ 0.19
COL4A3BPQ9Y5P4 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC16.25■□□□□ 0.19
COL4A3BPQ9Y5P4 ADM-202ENST00000524948 584 ntTSL 2 BASIC16.25■□□□□ 0.19
COL4A3BPQ9Y5P4 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC16.25■□□□□ 0.19
COL4A3BPQ9Y5P4 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC16.25■□□□□ 0.19
COL4A3BPQ9Y5P4 SYT17-208ENST00000568433 812 ntTSL 3 BASIC16.25■□□□□ 0.19
COL4A3BPQ9Y5P4 AC008805.1-201ENST00000590892 364 ntBASIC16.25■□□□□ 0.19
COL4A3BPQ9Y5P4 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC16.25■□□□□ 0.19
COL4A3BPQ9Y5P4 AL645939.5-201ENST00000606834 243 ntBASIC16.25■□□□□ 0.19
COL4A3BPQ9Y5P4 AP000346.4-201ENST00000614827 381 ntBASIC16.25■□□□□ 0.19
COL4A3BPQ9Y5P4 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
COL4A3BPQ9Y5P4 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
COL4A3BPQ9Y5P4 GSN-209ENST00000449733 2702 ntTSL 2 BASIC16.25■□□□□ 0.19
COL4A3BPQ9Y5P4 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COL4A3BPQ9Y5P4 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
COL4A3BPQ9Y5P4 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COL4A3BPQ9Y5P4 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
COL4A3BPQ9Y5P4 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC16.25■□□□□ 0.19
COL4A3BPQ9Y5P4 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COL4A3BPQ9Y5P4 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC16.25■□□□□ 0.19
COL4A3BPQ9Y5P4 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
COL4A3BPQ9Y5P4 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COL4A3BPQ9Y5P4 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COL4A3BPQ9Y5P4 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC16.25■□□□□ 0.19
COL4A3BPQ9Y5P4 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
COL4A3BPQ9Y5P4 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
COL4A3BPQ9Y5P4 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COL4A3BPQ9Y5P4 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
COL4A3BPQ9Y5P4 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
COL4A3BPQ9Y5P4 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC16.24■□□□□ 0.19
COL4A3BPQ9Y5P4 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
COL4A3BPQ9Y5P4 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
COL4A3BPQ9Y5P4 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
COL4A3BPQ9Y5P4 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
COL4A3BPQ9Y5P4 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
COL4A3BPQ9Y5P4 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC16.24■□□□□ 0.19
COL4A3BPQ9Y5P4 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
COL4A3BPQ9Y5P4 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
COL4A3BPQ9Y5P4 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC16.24■□□□□ 0.19
COL4A3BPQ9Y5P4 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
COL4A3BPQ9Y5P4 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
COL4A3BPQ9Y5P4 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
COL4A3BPQ9Y5P4 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC16.24■□□□□ 0.19
COL4A3BPQ9Y5P4 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC16.24■□□□□ 0.19
COL4A3BPQ9Y5P4 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
COL4A3BPQ9Y5P4 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
COL4A3BPQ9Y5P4 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
COL4A3BPQ9Y5P4 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
COL4A3BPQ9Y5P4 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC16.24■□□□□ 0.19
COL4A3BPQ9Y5P4 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
COL4A3BPQ9Y5P4 VDAC1P1-201ENST00000439229 848 ntBASIC16.24■□□□□ 0.19
COL4A3BPQ9Y5P4 AL645933.1-201ENST00000440087 609 ntBASIC16.24■□□□□ 0.19
COL4A3BPQ9Y5P4 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC16.24■□□□□ 0.19
COL4A3BPQ9Y5P4 MARK2P5-201ENST00000507649 634 ntBASIC16.24■□□□□ 0.19
COL4A3BPQ9Y5P4 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC16.24■□□□□ 0.19
COL4A3BPQ9Y5P4 SDHD-202ENST00000525291 790 ntTSL 3 BASIC16.24■□□□□ 0.19
COL4A3BPQ9Y5P4 NEU3-202ENST00000526068 431 ntTSL 2 BASIC16.24■□□□□ 0.19
COL4A3BPQ9Y5P4 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC16.24■□□□□ 0.19
COL4A3BPQ9Y5P4 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC16.24■□□□□ 0.19
COL4A3BPQ9Y5P4 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC16.24■□□□□ 0.19
COL4A3BPQ9Y5P4 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC16.24■□□□□ 0.19
COL4A3BPQ9Y5P4 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
COL4A3BPQ9Y5P4 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC16.24■□□□□ 0.19
COL4A3BPQ9Y5P4 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
COL4A3BPQ9Y5P4 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
COL4A3BPQ9Y5P4 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
COL4A3BPQ9Y5P4 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
COL4A3BPQ9Y5P4 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC16.24■□□□□ 0.19
COL4A3BPQ9Y5P4 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
COL4A3BPQ9Y5P4 C1R-202ENST00000536053 2347 ntTSL 2 BASIC16.24■□□□□ 0.19
COL4A3BPQ9Y5P4 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
COL4A3BPQ9Y5P4 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC16.24■□□□□ 0.19
COL4A3BPQ9Y5P4 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
COL4A3BPQ9Y5P4 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
COL4A3BPQ9Y5P4 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC16.24■□□□□ 0.19
COL4A3BPQ9Y5P4 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
COL4A3BPQ9Y5P4 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
COL4A3BPQ9Y5P4 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC16.24■□□□□ 0.19
COL4A3BPQ9Y5P4 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
COL4A3BPQ9Y5P4 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
COL4A3BPQ9Y5P4 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
COL4A3BPQ9Y5P4 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
COL4A3BPQ9Y5P4 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC16.23■□□□□ 0.19
COL4A3BPQ9Y5P4 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
COL4A3BPQ9Y5P4 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
COL4A3BPQ9Y5P4 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
COL4A3BPQ9Y5P4 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
COL4A3BPQ9Y5P4 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
COL4A3BPQ9Y5P4 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
COL4A3BPQ9Y5P4 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC16.23■□□□□ 0.19
COL4A3BPQ9Y5P4 AC012617.1-204ENST00000586340 2305 ntBASIC16.23■□□□□ 0.19
COL4A3BPQ9Y5P4 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
COL4A3BPQ9Y5P4 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC16.23■□□□□ 0.19
COL4A3BPQ9Y5P4 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
COL4A3BPQ9Y5P4 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
COL4A3BPQ9Y5P4 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms