Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 HVCN1-209ENST00000620084 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LHX6Q9UPM6 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LHX6Q9UPM6 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LHX6Q9UPM6 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LHX6Q9UPM6 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
LHX6Q9UPM6 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LHX6Q9UPM6 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LHX6Q9UPM6 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.04□□□□□ -0.16
LHX6Q9UPM6 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
LHX6Q9UPM6 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
LHX6Q9UPM6 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LHX6Q9UPM6 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LHX6Q9UPM6 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.03□□□□□ -0.16
LHX6Q9UPM6 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
LHX6Q9UPM6 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LHX6Q9UPM6 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LHX6Q9UPM6 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LHX6Q9UPM6 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
LHX6Q9UPM6 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.03□□□□□ -0.16
LHX6Q9UPM6 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
LHX6Q9UPM6 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LHX6Q9UPM6 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LHX6Q9UPM6 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.03□□□□□ -0.16
LHX6Q9UPM6 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
LHX6Q9UPM6 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LHX6Q9UPM6 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LHX6Q9UPM6 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LHX6Q9UPM6 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LHX6Q9UPM6 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC14.03□□□□□ -0.16
LHX6Q9UPM6 ATXN8OS-202ENST00000424524 1236 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LHX6Q9UPM6 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.03□□□□□ -0.16
LHX6Q9UPM6 GCSHP3-201ENST00000431120 391 ntBASIC14.03□□□□□ -0.16
LHX6Q9UPM6 AC026320.2-201ENST00000434379 478 ntBASIC14.03□□□□□ -0.16
LHX6Q9UPM6 SMAD9-IT1-201ENST00000437983 504 ntTSL 3 BASIC14.03□□□□□ -0.16
LHX6Q9UPM6 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC14.03□□□□□ -0.16
LHX6Q9UPM6 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC14.03□□□□□ -0.16
LHX6Q9UPM6 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC14.03□□□□□ -0.16
LHX6Q9UPM6 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.03□□□□□ -0.16
LHX6Q9UPM6 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC14.03□□□□□ -0.16
LHX6Q9UPM6 AC013452.2-201ENST00000557910 743 ntTSL 5 BASIC14.03□□□□□ -0.16
LHX6Q9UPM6 AC027020.1-201ENST00000559349 632 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LHX6Q9UPM6 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC14.03□□□□□ -0.16
LHX6Q9UPM6 NUDT4P2-201ENST00000578341 546 ntBASIC14.03□□□□□ -0.16
LHX6Q9UPM6 MIR3677-201ENST00000578964 60 ntBASIC14.03□□□□□ -0.16
LHX6Q9UPM6 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC14.03□□□□□ -0.16
LHX6Q9UPM6 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LHX6Q9UPM6 AL353622.2-201ENST00000605846 425 ntBASIC14.03□□□□□ -0.16
LHX6Q9UPM6 AC090772.4-201ENST00000623599 362 ntBASIC14.03□□□□□ -0.16
LHX6Q9UPM6 AP003072.5-201ENST00000623872 773 ntBASIC14.03□□□□□ -0.16
LHX6Q9UPM6 AC138466.5-201ENST00000624002 808 ntBASIC14.03□□□□□ -0.16
LHX6Q9UPM6 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LHX6Q9UPM6 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
LHX6Q9UPM6 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
LHX6Q9UPM6 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LHX6Q9UPM6 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
LHX6Q9UPM6 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.03□□□□□ -0.16
LHX6Q9UPM6 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LHX6Q9UPM6 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
LHX6Q9UPM6 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
LHX6Q9UPM6 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LHX6Q9UPM6 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LHX6Q9UPM6 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LHX6Q9UPM6 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LHX6Q9UPM6 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.02□□□□□ -0.16
LHX6Q9UPM6 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.02□□□□□ -0.16
LHX6Q9UPM6 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LHX6Q9UPM6 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LHX6Q9UPM6 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.02□□□□□ -0.16
LHX6Q9UPM6 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LHX6Q9UPM6 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LHX6Q9UPM6 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
LHX6Q9UPM6 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
LHX6Q9UPM6 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LHX6Q9UPM6 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC14.02□□□□□ -0.16
LHX6Q9UPM6 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LHX6Q9UPM6 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
LHX6Q9UPM6 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LHX6Q9UPM6 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
LHX6Q9UPM6 CBR3-AS1-204ENST00000453159 1499 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LHX6Q9UPM6 AC093536.2-201ENST00000565257 1406 ntBASIC14.02□□□□□ -0.16
LHX6Q9UPM6 FAM90A7P-201ENST00000382628 1395 ntBASIC14.02□□□□□ -0.17
LHX6Q9UPM6 FAM90A23P-201ENST00000400136 1395 ntBASIC14.02□□□□□ -0.17
LHX6Q9UPM6 FAM90A21P-201ENST00000510875 1396 ntBASIC14.02□□□□□ -0.17
LHX6Q9UPM6 FAM90A15P-201ENST00000514465 1395 ntBASIC14.02□□□□□ -0.17
LHX6Q9UPM6 FAM90A6P-201ENST00000515148 1394 ntBASIC14.02□□□□□ -0.17
LHX6Q9UPM6 FAM90A16P-201ENST00000526662 1395 ntBASIC14.02□□□□□ -0.17
LHX6Q9UPM6 FAM90A9P-201ENST00000527940 1395 ntBASIC14.02□□□□□ -0.17
LHX6Q9UPM6 FAM90A5P-201ENST00000528738 1395 ntBASIC14.02□□□□□ -0.17
LHX6Q9UPM6 FAM90A14P-201ENST00000530386 1395 ntBASIC14.02□□□□□ -0.17
LHX6Q9UPM6 FAM90A13P-201ENST00000534703 1395 ntBASIC14.02□□□□□ -0.17
LHX6Q9UPM6 RPS20P22-202ENST00000488192 1318 ntBASIC14.02□□□□□ -0.17
LHX6Q9UPM6 ENPP7P8-202ENST00000527856 1345 ntBASIC14.02□□□□□ -0.17
LHX6Q9UPM6 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
LHX6Q9UPM6 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC14.02□□□□□ -0.17
LHX6Q9UPM6 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LHX6Q9UPM6 CRHR1-205ENST00000352855 1146 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LHX6Q9UPM6 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC14.02□□□□□ -0.17
LHX6Q9UPM6 NUDT5-202ENST00000378937 919 ntTSL 3 BASIC14.02□□□□□ -0.17
LHX6Q9UPM6 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC14.02□□□□□ -0.17
LHX6Q9UPM6 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms