Protein–RNA interactions for Protein: Q9UNE2

RPH3AL, Rab effector Noc2, humanhuman

Predictions only

Length 315 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3ALQ9UNE2 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
RPH3ALQ9UNE2 RALGPS2-203ENST00000367634 7512 ntTSL 2 BASIC11.48□□□□□ -0.57
RPH3ALQ9UNE2 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
RPH3ALQ9UNE2 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
RPH3ALQ9UNE2 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
RPH3ALQ9UNE2 C10orf105-202ENST00000441508 4836 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
RPH3ALQ9UNE2 ZNF331-201ENST00000253144 5042 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RPH3ALQ9UNE2 KCNAB2-202ENST00000341524 4207 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
RPH3ALQ9UNE2 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
RPH3ALQ9UNE2 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
RPH3ALQ9UNE2 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC11.47□□□□□ -0.57
RPH3ALQ9UNE2 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RPH3ALQ9UNE2 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
RPH3ALQ9UNE2 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RPH3ALQ9UNE2 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
RPH3ALQ9UNE2 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RPH3ALQ9UNE2 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC11.47□□□□□ -0.57
RPH3ALQ9UNE2 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RPH3ALQ9UNE2 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RPH3ALQ9UNE2 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
RPH3ALQ9UNE2 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
RPH3ALQ9UNE2 ADK-205ENST00000539909 1866 ntTSL 2 BASIC11.47□□□□□ -0.57
RPH3ALQ9UNE2 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC11.47□□□□□ -0.57
RPH3ALQ9UNE2 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
RPH3ALQ9UNE2 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
RPH3ALQ9UNE2 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC11.47□□□□□ -0.57
RPH3ALQ9UNE2 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC11.47□□□□□ -0.57
RPH3ALQ9UNE2 PNPLA6-204ENST00000545201 4502 ntTSL 2 BASIC11.47□□□□□ -0.57
RPH3ALQ9UNE2 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
RPH3ALQ9UNE2 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC11.47□□□□□ -0.57
RPH3ALQ9UNE2 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RPH3ALQ9UNE2 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RPH3ALQ9UNE2 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC11.47□□□□□ -0.57
RPH3ALQ9UNE2 RAD18-204ENST00000418463 563 ntTSL 4 BASIC11.47□□□□□ -0.57
RPH3ALQ9UNE2 RAD18-205ENST00000421052 582 ntTSL 3 BASIC11.47□□□□□ -0.57
RPH3ALQ9UNE2 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC11.47□□□□□ -0.57
RPH3ALQ9UNE2 RPL13P2-201ENST00000440687 659 ntBASIC11.47□□□□□ -0.57
RPH3ALQ9UNE2 RN7SL618P-201ENST00000477850 296 ntBASIC11.47□□□□□ -0.57
RPH3ALQ9UNE2 POLD2P1-201ENST00000511220 997 ntBASIC11.47□□□□□ -0.57
RPH3ALQ9UNE2 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC11.47□□□□□ -0.57
RPH3ALQ9UNE2 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC11.47□□□□□ -0.57
RPH3ALQ9UNE2 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
RPH3ALQ9UNE2 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC11.47□□□□□ -0.57
RPH3ALQ9UNE2 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
RPH3ALQ9UNE2 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC11.47□□□□□ -0.57
RPH3ALQ9UNE2 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC11.47□□□□□ -0.57
RPH3ALQ9UNE2 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
RPH3ALQ9UNE2 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC11.47□□□□□ -0.57
RPH3ALQ9UNE2 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC11.47□□□□□ -0.57
RPH3ALQ9UNE2 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RPH3ALQ9UNE2 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
RPH3ALQ9UNE2 AC074044.1-201ENST00000609673 707 ntBASIC11.47□□□□□ -0.57
RPH3ALQ9UNE2 NME4-212ENST00000621774 904 ntTSL 3 BASIC11.47□□□□□ -0.57
RPH3ALQ9UNE2 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
RPH3ALQ9UNE2 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC11.47□□□□□ -0.57
RPH3ALQ9UNE2 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
RPH3ALQ9UNE2 ALK-205ENST00000618119 4646 ntTSL 5 BASIC11.47□□□□□ -0.57
RPH3ALQ9UNE2 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
RPH3ALQ9UNE2 OPA3-201ENST00000263275 7828 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
RPH3ALQ9UNE2 PPT2-EGFL8-202ENST00000422437 4181 ntAPPRIS P5 TSL 5 BASIC11.47□□□□□ -0.57
RPH3ALQ9UNE2 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
RPH3ALQ9UNE2 AC105206.1-202ENST00000314927 2368 ntBASIC11.47□□□□□ -0.57
RPH3ALQ9UNE2 CCDC187-204ENST00000624277 3918 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
RPH3ALQ9UNE2 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC11.47□□□□□ -0.57
RPH3ALQ9UNE2 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
RPH3ALQ9UNE2 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
RPH3ALQ9UNE2 DLGAP3-201ENST00000235180 3587 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
RPH3ALQ9UNE2 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC11.47□□□□□ -0.57
RPH3ALQ9UNE2 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RPH3ALQ9UNE2 MTUS2-206ENST00000612955 7430 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
RPH3ALQ9UNE2 TSN-212ENST00000536142 3328 ntTSL 2 BASIC11.47□□□□□ -0.57
RPH3ALQ9UNE2 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC11.47□□□□□ -0.57
RPH3ALQ9UNE2 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
RPH3ALQ9UNE2 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
RPH3ALQ9UNE2 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
RPH3ALQ9UNE2 ARHGEF2-206ENST00000462460 4438 ntTSL 5 BASIC11.46□□□□□ -0.57
RPH3ALQ9UNE2 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.57
RPH3ALQ9UNE2 AL592490.1-201ENST00000409186 6347 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
RPH3ALQ9UNE2 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
RPH3ALQ9UNE2 SH2D7-201ENST00000328828 2750 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
RPH3ALQ9UNE2 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC11.46□□□□□ -0.57
RPH3ALQ9UNE2 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
RPH3ALQ9UNE2 LSINCT5-201ENST00000626215 2647 ntBASIC11.46□□□□□ -0.57
RPH3ALQ9UNE2 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
RPH3ALQ9UNE2 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
RPH3ALQ9UNE2 RERE-212ENST00000476556 4598 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
RPH3ALQ9UNE2 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC11.46□□□□□ -0.57
RPH3ALQ9UNE2 TG-201ENST00000220616 8450 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
RPH3ALQ9UNE2 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
RPH3ALQ9UNE2 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
RPH3ALQ9UNE2 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
RPH3ALQ9UNE2 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
RPH3ALQ9UNE2 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC11.46□□□□□ -0.57
RPH3ALQ9UNE2 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
RPH3ALQ9UNE2 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
RPH3ALQ9UNE2 TRAF3-201ENST00000347662 7700 ntTSL 5 BASIC11.46□□□□□ -0.57
RPH3ALQ9UNE2 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.57
RPH3ALQ9UNE2 PCDHB17P-202ENST00000623466 3066 ntBASIC11.46□□□□□ -0.57
RPH3ALQ9UNE2 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC11.46□□□□□ -0.57
RPH3ALQ9UNE2 SLC35A4-201ENST00000323146 3041 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms