Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 KRT8P18-201ENST00000413425 1445 ntBASIC19.18■□□□□ 0.66
NPC1L1Q9UHC9 AC061965.1-201ENST00000560524 1465 ntBASIC19.18■□□□□ 0.66
NPC1L1Q9UHC9 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NPC1L1Q9UHC9 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NPC1L1Q9UHC9 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NPC1L1Q9UHC9 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NPC1L1Q9UHC9 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NPC1L1Q9UHC9 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC19.18■□□□□ 0.66
NPC1L1Q9UHC9 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NPC1L1Q9UHC9 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
NPC1L1Q9UHC9 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC19.18■□□□□ 0.66
NPC1L1Q9UHC9 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC19.18■□□□□ 0.66
NPC1L1Q9UHC9 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
NPC1L1Q9UHC9 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC19.18■□□□□ 0.66
NPC1L1Q9UHC9 RPL8P2-201ENST00000430538 502 ntBASIC19.18■□□□□ 0.66
NPC1L1Q9UHC9 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC19.18■□□□□ 0.66
NPC1L1Q9UHC9 AC130709.1-201ENST00000484779 1212 ntBASIC19.18■□□□□ 0.66
NPC1L1Q9UHC9 AC019193.1-201ENST00000506678 823 ntBASIC19.18■□□□□ 0.66
NPC1L1Q9UHC9 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC19.18■□□□□ 0.66
NPC1L1Q9UHC9 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
NPC1L1Q9UHC9 AC138894.2-201ENST00000602838 371 ntBASIC19.18■□□□□ 0.66
NPC1L1Q9UHC9 AC007326.1-201ENST00000604539 458 ntBASIC19.18■□□□□ 0.66
NPC1L1Q9UHC9 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC19.18■□□□□ 0.66
NPC1L1Q9UHC9 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC19.18■□□□□ 0.66
NPC1L1Q9UHC9 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NPC1L1Q9UHC9 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC19.18■□□□□ 0.66
NPC1L1Q9UHC9 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC19.18■□□□□ 0.66
NPC1L1Q9UHC9 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
NPC1L1Q9UHC9 AL591122.2-201ENST00000624125 1853 ntBASIC19.17■□□□□ 0.66
NPC1L1Q9UHC9 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC19.17■□□□□ 0.66
NPC1L1Q9UHC9 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
NPC1L1Q9UHC9 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NPC1L1Q9UHC9 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NPC1L1Q9UHC9 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
NPC1L1Q9UHC9 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NPC1L1Q9UHC9 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
NPC1L1Q9UHC9 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
NPC1L1Q9UHC9 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
NPC1L1Q9UHC9 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NPC1L1Q9UHC9 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NPC1L1Q9UHC9 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
NPC1L1Q9UHC9 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC19.17■□□□□ 0.66
NPC1L1Q9UHC9 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
NPC1L1Q9UHC9 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC19.17■□□□□ 0.66
NPC1L1Q9UHC9 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NPC1L1Q9UHC9 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NPC1L1Q9UHC9 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NPC1L1Q9UHC9 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC19.17■□□□□ 0.66
NPC1L1Q9UHC9 AC007718.1-201ENST00000621078 280 ntBASIC19.17■□□□□ 0.66
NPC1L1Q9UHC9 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
NPC1L1Q9UHC9 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NPC1L1Q9UHC9 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NPC1L1Q9UHC9 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
NPC1L1Q9UHC9 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
NPC1L1Q9UHC9 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
NPC1L1Q9UHC9 AC004554.1-201ENST00000422830 1468 ntBASIC19.16■□□□□ 0.66
NPC1L1Q9UHC9 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
NPC1L1Q9UHC9 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NPC1L1Q9UHC9 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NPC1L1Q9UHC9 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC19.16■□□□□ 0.66
NPC1L1Q9UHC9 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NPC1L1Q9UHC9 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
NPC1L1Q9UHC9 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
NPC1L1Q9UHC9 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC19.16■□□□□ 0.66
NPC1L1Q9UHC9 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NPC1L1Q9UHC9 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NPC1L1Q9UHC9 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NPC1L1Q9UHC9 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NPC1L1Q9UHC9 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC19.16■□□□□ 0.66
NPC1L1Q9UHC9 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NPC1L1Q9UHC9 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
NPC1L1Q9UHC9 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NPC1L1Q9UHC9 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NPC1L1Q9UHC9 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC19.16■□□□□ 0.66
NPC1L1Q9UHC9 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NPC1L1Q9UHC9 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC19.16■□□□□ 0.66
NPC1L1Q9UHC9 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
NPC1L1Q9UHC9 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC19.16■□□□□ 0.66
NPC1L1Q9UHC9 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC19.16■□□□□ 0.66
NPC1L1Q9UHC9 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC19.16■□□□□ 0.66
NPC1L1Q9UHC9 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC19.16■□□□□ 0.66
NPC1L1Q9UHC9 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC19.16■□□□□ 0.66
NPC1L1Q9UHC9 RN7SL788P-201ENST00000460504 316 ntBASIC19.16■□□□□ 0.66
NPC1L1Q9UHC9 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC19.16■□□□□ 0.66
NPC1L1Q9UHC9 ORAOV1P1-201ENST00000503108 395 ntBASIC19.16■□□□□ 0.66
NPC1L1Q9UHC9 AC095040.1-201ENST00000513286 675 ntBASIC19.16■□□□□ 0.66
NPC1L1Q9UHC9 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC19.16■□□□□ 0.66
NPC1L1Q9UHC9 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
NPC1L1Q9UHC9 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NPC1L1Q9UHC9 HLA-DQB1-202ENST00000399079 1501 ntBASIC19.16■□□□□ 0.66
NPC1L1Q9UHC9 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NPC1L1Q9UHC9 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC19.16■□□□□ 0.66
NPC1L1Q9UHC9 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NPC1L1Q9UHC9 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC19.16■□□□□ 0.66
NPC1L1Q9UHC9 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
NPC1L1Q9UHC9 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
NPC1L1Q9UHC9 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
NPC1L1Q9UHC9 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NPC1L1Q9UHC9 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC19.15■□□□□ 0.66
NPC1L1Q9UHC9 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms