Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
SPASTQ9UBP0 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.53□□□□□ -0.08
SPASTQ9UBP0 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
SPASTQ9UBP0 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SPASTQ9UBP0 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.53□□□□□ -0.08
SPASTQ9UBP0 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.53□□□□□ -0.08
SPASTQ9UBP0 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC14.53□□□□□ -0.08
SPASTQ9UBP0 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SPASTQ9UBP0 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SPASTQ9UBP0 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.53□□□□□ -0.08
SPASTQ9UBP0 AC244394.1-201ENST00000435000 1665 ntBASIC14.53□□□□□ -0.08
SPASTQ9UBP0 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC14.53□□□□□ -0.08
SPASTQ9UBP0 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC14.53□□□□□ -0.08
SPASTQ9UBP0 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
SPASTQ9UBP0 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SPASTQ9UBP0 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC14.53□□□□□ -0.08
SPASTQ9UBP0 AL035414.1-201ENST00000451327 857 ntBASIC14.53□□□□□ -0.08
SPASTQ9UBP0 SUPT4H1P2-201ENST00000501248 353 ntBASIC14.53□□□□□ -0.08
SPASTQ9UBP0 AC024681.1-201ENST00000521917 487 ntBASIC14.53□□□□□ -0.08
SPASTQ9UBP0 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC14.53□□□□□ -0.08
SPASTQ9UBP0 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC14.53□□□□□ -0.08
SPASTQ9UBP0 AL161670.2-201ENST00000557650 1227 ntBASIC14.53□□□□□ -0.08
SPASTQ9UBP0 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC14.53□□□□□ -0.08
SPASTQ9UBP0 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SPASTQ9UBP0 BX088702.1-201ENST00000610784 235 ntBASIC14.53□□□□□ -0.08
SPASTQ9UBP0 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC14.53□□□□□ -0.08
SPASTQ9UBP0 AC027601.3-201ENST00000622907 509 ntBASIC14.53□□□□□ -0.08
SPASTQ9UBP0 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.53□□□□□ -0.08
SPASTQ9UBP0 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SPASTQ9UBP0 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.53□□□□□ -0.08
SPASTQ9UBP0 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SPASTQ9UBP0 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SPASTQ9UBP0 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.53□□□□□ -0.08
SPASTQ9UBP0 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SPASTQ9UBP0 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.53□□□□□ -0.08
SPASTQ9UBP0 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.53□□□□□ -0.08
SPASTQ9UBP0 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SPASTQ9UBP0 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SPASTQ9UBP0 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
SPASTQ9UBP0 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SPASTQ9UBP0 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
SPASTQ9UBP0 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
SPASTQ9UBP0 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SPASTQ9UBP0 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
SPASTQ9UBP0 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SPASTQ9UBP0 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
SPASTQ9UBP0 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.52□□□□□ -0.08
SPASTQ9UBP0 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SPASTQ9UBP0 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC14.52□□□□□ -0.08
SPASTQ9UBP0 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
SPASTQ9UBP0 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SPASTQ9UBP0 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SPASTQ9UBP0 PEG13-201ENST00000631594 5667 ntBASIC14.52□□□□□ -0.08
SPASTQ9UBP0 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
SPASTQ9UBP0 USP3-204ENST00000540797 5474 ntTSL 2 BASIC14.52□□□□□ -0.08
SPASTQ9UBP0 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SPASTQ9UBP0 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SPASTQ9UBP0 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SPASTQ9UBP0 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
SPASTQ9UBP0 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SPASTQ9UBP0 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SPASTQ9UBP0 AC008132.1-202ENST00000342005 1389 ntBASIC14.52□□□□□ -0.08
SPASTQ9UBP0 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
SPASTQ9UBP0 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SPASTQ9UBP0 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SPASTQ9UBP0 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SPASTQ9UBP0 RN7SKP214-201ENST00000364208 315 ntBASIC14.52□□□□□ -0.09
SPASTQ9UBP0 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SPASTQ9UBP0 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC14.52□□□□□ -0.09
SPASTQ9UBP0 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SPASTQ9UBP0 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC14.52□□□□□ -0.09
SPASTQ9UBP0 IMP3P2-201ENST00000489760 475 ntBASIC14.52□□□□□ -0.09
SPASTQ9UBP0 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC14.52□□□□□ -0.09
SPASTQ9UBP0 VPS18-202ENST00000558474 873 ntTSL 3 BASIC14.52□□□□□ -0.09
SPASTQ9UBP0 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SPASTQ9UBP0 SNORD3B-2-202ENST00000571722 791 ntBASIC14.52□□□□□ -0.09
SPASTQ9UBP0 AL132994.2-201ENST00000603120 687 ntBASIC14.52□□□□□ -0.09
SPASTQ9UBP0 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC14.52□□□□□ -0.09
SPASTQ9UBP0 RPL35-206ENST00000629845 340 ntTSL 5 BASIC14.52□□□□□ -0.09
SPASTQ9UBP0 NAP1L6-202ENST00000641404 1222 ntBASIC14.52□□□□□ -0.09
SPASTQ9UBP0 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SPASTQ9UBP0 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.52□□□□□ -0.09
SPASTQ9UBP0 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SPASTQ9UBP0 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SPASTQ9UBP0 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SPASTQ9UBP0 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
SPASTQ9UBP0 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SPASTQ9UBP0 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SPASTQ9UBP0 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
SPASTQ9UBP0 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
SPASTQ9UBP0 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14.52□□□□□ -0.09
SPASTQ9UBP0 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SPASTQ9UBP0 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SPASTQ9UBP0 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.52□□□□□ -0.09
SPASTQ9UBP0 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.52□□□□□ -0.09
SPASTQ9UBP0 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.52□□□□□ -0.09
SPASTQ9UBP0 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SPASTQ9UBP0 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC14.52□□□□□ -0.09
SPASTQ9UBP0 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SPASTQ9UBP0 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms