Protein–RNA interactions for Protein: Q9P2B4

CTTNBP2NL, CTTNBP2 N-terminal-like protein, humanhuman

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTTNBP2NLQ9P2B4 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CTTNBP2NLQ9P2B4 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CTTNBP2NLQ9P2B4 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CTTNBP2NLQ9P2B4 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CTTNBP2NLQ9P2B4 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC15.5■□□□□ 0.07
CTTNBP2NLQ9P2B4 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CTTNBP2NLQ9P2B4 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CTTNBP2NLQ9P2B4 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
CTTNBP2NLQ9P2B4 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC15.5■□□□□ 0.07
CTTNBP2NLQ9P2B4 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC15.5■□□□□ 0.07
CTTNBP2NLQ9P2B4 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CTTNBP2NLQ9P2B4 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CTTNBP2NLQ9P2B4 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CTTNBP2NLQ9P2B4 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CTTNBP2NLQ9P2B4 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CTTNBP2NLQ9P2B4 ARSEP1-201ENST00000420443 635 ntBASIC15.5■□□□□ 0.07
CTTNBP2NLQ9P2B4 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC15.5■□□□□ 0.07
CTTNBP2NLQ9P2B4 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC15.5■□□□□ 0.07
CTTNBP2NLQ9P2B4 AL590640.2-201ENST00000457038 527 ntBASIC15.5■□□□□ 0.07
CTTNBP2NLQ9P2B4 RN7SL752P-201ENST00000463779 287 ntBASIC15.5■□□□□ 0.07
CTTNBP2NLQ9P2B4 AC011495.1-201ENST00000498085 584 ntBASIC15.5■□□□□ 0.07
CTTNBP2NLQ9P2B4 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC15.5■□□□□ 0.07
CTTNBP2NLQ9P2B4 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC15.5■□□□□ 0.07
CTTNBP2NLQ9P2B4 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC15.5■□□□□ 0.07
CTTNBP2NLQ9P2B4 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC15.5■□□□□ 0.07
CTTNBP2NLQ9P2B4 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC15.5■□□□□ 0.07
CTTNBP2NLQ9P2B4 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC15.5■□□□□ 0.07
CTTNBP2NLQ9P2B4 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CTTNBP2NLQ9P2B4 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CTTNBP2NLQ9P2B4 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CTTNBP2NLQ9P2B4 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CTTNBP2NLQ9P2B4 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CTTNBP2NLQ9P2B4 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CTTNBP2NLQ9P2B4 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CTTNBP2NLQ9P2B4 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CTTNBP2NLQ9P2B4 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CTTNBP2NLQ9P2B4 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CTTNBP2NLQ9P2B4 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CTTNBP2NLQ9P2B4 ANKRD30BP2-201ENST00000435744 1610 ntBASIC15.5■□□□□ 0.07
CTTNBP2NLQ9P2B4 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CTTNBP2NLQ9P2B4 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CTTNBP2NLQ9P2B4 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CTTNBP2NLQ9P2B4 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CTTNBP2NLQ9P2B4 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC15.5■□□□□ 0.07
CTTNBP2NLQ9P2B4 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CTTNBP2NLQ9P2B4 KRT8P28-201ENST00000433288 1390 ntBASIC15.49■□□□□ 0.07
CTTNBP2NLQ9P2B4 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CTTNBP2NLQ9P2B4 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
CTTNBP2NLQ9P2B4 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CTTNBP2NLQ9P2B4 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC15.49■□□□□ 0.07
CTTNBP2NLQ9P2B4 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CTTNBP2NLQ9P2B4 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC15.49■□□□□ 0.07
CTTNBP2NLQ9P2B4 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CTTNBP2NLQ9P2B4 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC15.49■□□□□ 0.07
CTTNBP2NLQ9P2B4 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC15.49■□□□□ 0.07
CTTNBP2NLQ9P2B4 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
CTTNBP2NLQ9P2B4 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC15.49■□□□□ 0.07
CTTNBP2NLQ9P2B4 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CTTNBP2NLQ9P2B4 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CTTNBP2NLQ9P2B4 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC15.49■□□□□ 0.07
CTTNBP2NLQ9P2B4 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CTTNBP2NLQ9P2B4 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC15.49■□□□□ 0.07
CTTNBP2NLQ9P2B4 ZBTB12BP-201ENST00000314232 1122 ntBASIC15.49■□□□□ 0.07
CTTNBP2NLQ9P2B4 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CTTNBP2NLQ9P2B4 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CTTNBP2NLQ9P2B4 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
CTTNBP2NLQ9P2B4 C2orf27AP3-201ENST00000434123 579 ntBASIC15.49■□□□□ 0.07
CTTNBP2NLQ9P2B4 FAM8A4P-201ENST00000435433 1213 ntBASIC15.49■□□□□ 0.07
CTTNBP2NLQ9P2B4 RN7SL837P-201ENST00000463010 287 ntBASIC15.49■□□□□ 0.07
CTTNBP2NLQ9P2B4 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC15.49■□□□□ 0.07
CTTNBP2NLQ9P2B4 CDC23-208ENST00000505120 455 ntTSL 3 BASIC15.49■□□□□ 0.07
CTTNBP2NLQ9P2B4 RNA5SP486-201ENST00000515961 83 ntBASIC15.49■□□□□ 0.07
CTTNBP2NLQ9P2B4 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC15.49■□□□□ 0.07
CTTNBP2NLQ9P2B4 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC15.49■□□□□ 0.07
CTTNBP2NLQ9P2B4 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CTTNBP2NLQ9P2B4 AL355385.1-201ENST00000606123 409 ntBASIC15.49■□□□□ 0.07
CTTNBP2NLQ9P2B4 AL354718.3-201ENST00000616414 581 ntBASIC15.49■□□□□ 0.07
CTTNBP2NLQ9P2B4 CR382287.1-201ENST00000623954 586 ntBASIC15.49■□□□□ 0.07
CTTNBP2NLQ9P2B4 AC002472.3-201ENST00000640124 621 ntBASIC15.49■□□□□ 0.07
CTTNBP2NLQ9P2B4 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CTTNBP2NLQ9P2B4 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CTTNBP2NLQ9P2B4 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC15.49■□□□□ 0.07
CTTNBP2NLQ9P2B4 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CTTNBP2NLQ9P2B4 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CTTNBP2NLQ9P2B4 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CTTNBP2NLQ9P2B4 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC15.49■□□□□ 0.07
CTTNBP2NLQ9P2B4 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CTTNBP2NLQ9P2B4 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
CTTNBP2NLQ9P2B4 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CTTNBP2NLQ9P2B4 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CTTNBP2NLQ9P2B4 LSS-211ENST00000522411 2523 ntTSL 2 BASIC15.49■□□□□ 0.07
CTTNBP2NLQ9P2B4 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CTTNBP2NLQ9P2B4 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC15.49■□□□□ 0.07
CTTNBP2NLQ9P2B4 AL122018.1-201ENST00000446607 2310 ntBASIC15.49■□□□□ 0.07
CTTNBP2NLQ9P2B4 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC15.49■□□□□ 0.07
CTTNBP2NLQ9P2B4 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CTTNBP2NLQ9P2B4 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CTTNBP2NLQ9P2B4 AC111170.3-201ENST00000624282 2464 ntBASIC15.49■□□□□ 0.07
CTTNBP2NLQ9P2B4 AL157996.1-201ENST00000624684 2299 ntBASIC15.48■□□□□ 0.07
CTTNBP2NLQ9P2B4 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms