Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SSBP3Q9BWW4 PCBP2-OT1-201ENST00000634357 590 ntBASIC12.19□□□□□ -0.46
SSBP3Q9BWW4 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SSBP3Q9BWW4 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SSBP3Q9BWW4 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SSBP3Q9BWW4 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
SSBP3Q9BWW4 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
SSBP3Q9BWW4 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
SSBP3Q9BWW4 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
SSBP3Q9BWW4 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SSBP3Q9BWW4 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SSBP3Q9BWW4 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SSBP3Q9BWW4 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
SSBP3Q9BWW4 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
SSBP3Q9BWW4 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SSBP3Q9BWW4 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
SSBP3Q9BWW4 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
SSBP3Q9BWW4 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC12.19□□□□□ -0.46
SSBP3Q9BWW4 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC12.19□□□□□ -0.46
SSBP3Q9BWW4 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SSBP3Q9BWW4 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC12.19□□□□□ -0.46
SSBP3Q9BWW4 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
SSBP3Q9BWW4 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
SSBP3Q9BWW4 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
SSBP3Q9BWW4 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
SSBP3Q9BWW4 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
SSBP3Q9BWW4 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SSBP3Q9BWW4 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
SSBP3Q9BWW4 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
SSBP3Q9BWW4 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
SSBP3Q9BWW4 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC12.18□□□□□ -0.46
SSBP3Q9BWW4 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
SSBP3Q9BWW4 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
SSBP3Q9BWW4 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SSBP3Q9BWW4 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
SSBP3Q9BWW4 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SSBP3Q9BWW4 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SSBP3Q9BWW4 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC12.18□□□□□ -0.46
SSBP3Q9BWW4 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SSBP3Q9BWW4 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SSBP3Q9BWW4 MIR769-201ENST00000390225 118 ntBASIC12.18□□□□□ -0.46
SSBP3Q9BWW4 CRCP-204ENST00000398684 492 ntTSL 2 BASIC12.18□□□□□ -0.46
SSBP3Q9BWW4 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC12.18□□□□□ -0.46
SSBP3Q9BWW4 KLF2P1-201ENST00000447438 1042 ntBASIC12.18□□□□□ -0.46
SSBP3Q9BWW4 AC104073.2-201ENST00000453737 312 ntBASIC12.18□□□□□ -0.46
SSBP3Q9BWW4 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC12.18□□□□□ -0.46
SSBP3Q9BWW4 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC12.18□□□□□ -0.46
SSBP3Q9BWW4 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC12.18□□□□□ -0.46
SSBP3Q9BWW4 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC12.18□□□□□ -0.46
SSBP3Q9BWW4 AP000346.4-201ENST00000614827 381 ntBASIC12.18□□□□□ -0.46
SSBP3Q9BWW4 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
SSBP3Q9BWW4 AC100757.4-201ENST00000626934 759 ntBASIC12.18□□□□□ -0.46
SSBP3Q9BWW4 AC068587.8-201ENST00000641239 219 ntBASIC12.18□□□□□ -0.46
SSBP3Q9BWW4 Z98259.2-201ENST00000641583 609 ntBASIC12.18□□□□□ -0.46
SSBP3Q9BWW4 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SSBP3Q9BWW4 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SSBP3Q9BWW4 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SSBP3Q9BWW4 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
SSBP3Q9BWW4 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC12.18□□□□□ -0.46
SSBP3Q9BWW4 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC12.18□□□□□ -0.46
SSBP3Q9BWW4 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
SSBP3Q9BWW4 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SSBP3Q9BWW4 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
SSBP3Q9BWW4 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC12.18□□□□□ -0.46
SSBP3Q9BWW4 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SSBP3Q9BWW4 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SSBP3Q9BWW4 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC12.18□□□□□ -0.46
SSBP3Q9BWW4 LINC01230-201ENST00000625222 3017 ntBASIC12.18□□□□□ -0.46
SSBP3Q9BWW4 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
SSBP3Q9BWW4 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC12.18□□□□□ -0.46
SSBP3Q9BWW4 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SSBP3Q9BWW4 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC12.18□□□□□ -0.46
SSBP3Q9BWW4 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
SSBP3Q9BWW4 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC12.18□□□□□ -0.46
SSBP3Q9BWW4 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SSBP3Q9BWW4 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
SSBP3Q9BWW4 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SSBP3Q9BWW4 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SSBP3Q9BWW4 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
SSBP3Q9BWW4 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC12.17□□□□□ -0.46
SSBP3Q9BWW4 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SSBP3Q9BWW4 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SSBP3Q9BWW4 AC018529.2-202ENST00000611482 3087 ntBASIC12.17□□□□□ -0.46
SSBP3Q9BWW4 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SSBP3Q9BWW4 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SSBP3Q9BWW4 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC12.17□□□□□ -0.46
SSBP3Q9BWW4 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SSBP3Q9BWW4 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
SSBP3Q9BWW4 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SSBP3Q9BWW4 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC12.17□□□□□ -0.46
SSBP3Q9BWW4 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SSBP3Q9BWW4 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC12.17□□□□□ -0.46
SSBP3Q9BWW4 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SSBP3Q9BWW4 AC092053.3-201ENST00000641308 4975 ntBASIC12.17□□□□□ -0.46
SSBP3Q9BWW4 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC12.17□□□□□ -0.46
SSBP3Q9BWW4 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC12.17□□□□□ -0.46
SSBP3Q9BWW4 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SSBP3Q9BWW4 NPPA-201ENST00000376476 728 ntTSL 3 BASIC12.17□□□□□ -0.46
SSBP3Q9BWW4 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SSBP3Q9BWW4 HNRNPA1P27-201ENST00000412087 955 ntBASIC12.17□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms