Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN18Q99952 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN18Q99952 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
PTPN18Q99952 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN18Q99952 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN18Q99952 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN18Q99952 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN18Q99952 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.29■□□□□ 0.2
PTPN18Q99952 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN18Q99952 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN18Q99952 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN18Q99952 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.29■□□□□ 0.2
PTPN18Q99952 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
PTPN18Q99952 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.29■□□□□ 0.2
PTPN18Q99952 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN18Q99952 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN18Q99952 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PTPN18Q99952 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN18Q99952 GOLGA8UP-201ENST00000527159 1755 ntBASIC16.28■□□□□ 0.2
PTPN18Q99952 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.28■□□□□ 0.2
PTPN18Q99952 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN18Q99952 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN18Q99952 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.28■□□□□ 0.2
PTPN18Q99952 AC232323.1-201ENST00000540724 2099 ntBASIC16.28■□□□□ 0.2
PTPN18Q99952 NECTIN1-203ENST00000341398 1377 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN18Q99952 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
PTPN18Q99952 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN18Q99952 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC16.28■□□□□ 0.2
PTPN18Q99952 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN18Q99952 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.28■□□□□ 0.2
PTPN18Q99952 RHOC-205ENST00000369636 786 ntTSL 2 BASIC16.28■□□□□ 0.2
PTPN18Q99952 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PTPN18Q99952 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
PTPN18Q99952 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC16.28■□□□□ 0.2
PTPN18Q99952 SMAD9-IT1-201ENST00000437983 504 ntTSL 3 BASIC16.28■□□□□ 0.2
PTPN18Q99952 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC16.28■□□□□ 0.2
PTPN18Q99952 EIF5A2-205ENST00000487522 565 ntTSL 3 BASIC16.28■□□□□ 0.2
PTPN18Q99952 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN18Q99952 ANKRD26P1-203ENST00000569528 966 ntBASIC16.28■□□□□ 0.2
PTPN18Q99952 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC16.28■□□□□ 0.2
PTPN18Q99952 AC011489.1-201ENST00000586744 690 ntTSL 3 BASIC16.28■□□□□ 0.2
PTPN18Q99952 AC008906.2-201ENST00000606656 474 ntTSL 2 BASIC16.28■□□□□ 0.2
PTPN18Q99952 PNPT1-207ENST00000625249 216 ntTSL 5 BASIC16.28■□□□□ 0.2
PTPN18Q99952 AC110057.1-201ENST00000636031 898 ntBASIC16.28■□□□□ 0.2
PTPN18Q99952 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN18Q99952 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN18Q99952 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC16.28■□□□□ 0.2
PTPN18Q99952 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN18Q99952 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN18Q99952 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC16.28■□□□□ 0.2
PTPN18Q99952 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
PTPN18Q99952 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.28■□□□□ 0.2
PTPN18Q99952 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN18Q99952 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC16.28■□□□□ 0.2
PTPN18Q99952 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN18Q99952 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN18Q99952 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.28■□□□□ 0.2
PTPN18Q99952 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN18Q99952 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN18Q99952 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC16.27■□□□□ 0.2
PTPN18Q99952 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC16.27■□□□□ 0.2
PTPN18Q99952 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN18Q99952 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN18Q99952 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
PTPN18Q99952 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
PTPN18Q99952 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
PTPN18Q99952 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN18Q99952 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN18Q99952 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN18Q99952 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN18Q99952 AQP7-202ENST00000377425 1068 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN18Q99952 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC16.27■□□□□ 0.2
PTPN18Q99952 HNRNPA1P21-201ENST00000424115 961 ntBASIC16.27■□□□□ 0.2
PTPN18Q99952 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC16.27■□□□□ 0.2
PTPN18Q99952 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN18Q99952 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN18Q99952 MIR2278-201ENST00000516344 96 ntBASIC16.27■□□□□ 0.2
PTPN18Q99952 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN18Q99952 AC092756.1-201ENST00000560248 448 ntTSL 3 BASIC16.27■□□□□ 0.2
PTPN18Q99952 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN18Q99952 GNG14-201ENST00000640117 210 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
PTPN18Q99952 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN18Q99952 F10-201ENST00000375551 1509 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN18Q99952 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN18Q99952 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.27■□□□□ 0.2
PTPN18Q99952 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN18Q99952 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
PTPN18Q99952 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.27■□□□□ 0.19
PTPN18Q99952 RPL13AP3-202ENST00000494676 1473 ntBASIC16.27■□□□□ 0.19
PTPN18Q99952 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PTPN18Q99952 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
PTPN18Q99952 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
PTPN18Q99952 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
PTPN18Q99952 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.19
PTPN18Q99952 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
PTPN18Q99952 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PTPN18Q99952 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC16.27■□□□□ 0.19
PTPN18Q99952 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
PTPN18Q99952 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PTPN18Q99952 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms