Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
COL21A1Q96P44 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC13.81□□□□□ -0.2
COL21A1Q96P44 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
COL21A1Q96P44 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
COL21A1Q96P44 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
COL21A1Q96P44 AC090505.1-201ENST00000430515 1834 ntBASIC13.81□□□□□ -0.2
COL21A1Q96P44 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC13.81□□□□□ -0.2
COL21A1Q96P44 AL354989.2-201ENST00000435838 1540 ntBASIC13.81□□□□□ -0.2
COL21A1Q96P44 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
COL21A1Q96P44 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
COL21A1Q96P44 RET-205ENST00000615310 4337 ntTSL 5 BASIC13.81□□□□□ -0.2
COL21A1Q96P44 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
COL21A1Q96P44 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
COL21A1Q96P44 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
COL21A1Q96P44 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
COL21A1Q96P44 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
COL21A1Q96P44 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
COL21A1Q96P44 SERF2-209ENST00000409646 559 ntTSL 4 BASIC13.81□□□□□ -0.2
COL21A1Q96P44 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC13.81□□□□□ -0.2
COL21A1Q96P44 FAM8A4P-201ENST00000435433 1213 ntBASIC13.81□□□□□ -0.2
COL21A1Q96P44 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC13.81□□□□□ -0.2
COL21A1Q96P44 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC13.81□□□□□ -0.2
COL21A1Q96P44 IGHV3-71-201ENST00000523324 359 ntBASIC13.81□□□□□ -0.2
COL21A1Q96P44 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC13.81□□□□□ -0.2
COL21A1Q96P44 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
COL21A1Q96P44 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
COL21A1Q96P44 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
COL21A1Q96P44 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
COL21A1Q96P44 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC13.81□□□□□ -0.2
COL21A1Q96P44 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
COL21A1Q96P44 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC13.81□□□□□ -0.2
COL21A1Q96P44 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC13.81□□□□□ -0.2
COL21A1Q96P44 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC13.81□□□□□ -0.2
COL21A1Q96P44 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC13.81□□□□□ -0.2
COL21A1Q96P44 WNT11-204ENST00000621122 789 ntTSL 5 BASIC13.81□□□□□ -0.2
COL21A1Q96P44 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC13.81□□□□□ -0.2
COL21A1Q96P44 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
COL21A1Q96P44 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
COL21A1Q96P44 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
COL21A1Q96P44 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
COL21A1Q96P44 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
COL21A1Q96P44 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
COL21A1Q96P44 AC016397.2-201ENST00000624848 1985 ntBASIC13.81□□□□□ -0.2
COL21A1Q96P44 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
COL21A1Q96P44 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC13.81□□□□□ -0.2
COL21A1Q96P44 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
COL21A1Q96P44 FKBP4P6-201ENST00000457486 1332 ntBASIC13.81□□□□□ -0.2
COL21A1Q96P44 MRPL37P1-201ENST00000592451 1337 ntBASIC13.81□□□□□ -0.2
COL21A1Q96P44 AL031595.1-201ENST00000623969 4709 ntBASIC13.81□□□□□ -0.2
COL21A1Q96P44 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
COL21A1Q96P44 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
COL21A1Q96P44 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
COL21A1Q96P44 LSS-211ENST00000522411 2523 ntTSL 2 BASIC13.81□□□□□ -0.2
COL21A1Q96P44 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
COL21A1Q96P44 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
COL21A1Q96P44 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
COL21A1Q96P44 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
COL21A1Q96P44 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
COL21A1Q96P44 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
COL21A1Q96P44 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
COL21A1Q96P44 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
COL21A1Q96P44 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
COL21A1Q96P44 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
COL21A1Q96P44 PPT1-213ENST00000641319 2388 ntBASIC13.8□□□□□ -0.2
COL21A1Q96P44 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
COL21A1Q96P44 ANKRD30BP2-201ENST00000435744 1610 ntBASIC13.8□□□□□ -0.2
COL21A1Q96P44 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
COL21A1Q96P44 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
COL21A1Q96P44 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
COL21A1Q96P44 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
COL21A1Q96P44 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
COL21A1Q96P44 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
COL21A1Q96P44 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC13.8□□□□□ -0.2
COL21A1Q96P44 GK-202ENST00000378941 458 ntTSL 3 BASIC13.8□□□□□ -0.2
COL21A1Q96P44 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
COL21A1Q96P44 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
COL21A1Q96P44 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC13.8□□□□□ -0.2
COL21A1Q96P44 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
COL21A1Q96P44 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC13.8□□□□□ -0.2
COL21A1Q96P44 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC13.8□□□□□ -0.2
COL21A1Q96P44 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC13.8□□□□□ -0.2
COL21A1Q96P44 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC13.8□□□□□ -0.2
COL21A1Q96P44 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
COL21A1Q96P44 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
COL21A1Q96P44 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC13.8□□□□□ -0.2
COL21A1Q96P44 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC13.8□□□□□ -0.2
COL21A1Q96P44 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
COL21A1Q96P44 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC13.8□□□□□ -0.2
COL21A1Q96P44 MIR6805-201ENST00000615055 62 ntBASIC13.8□□□□□ -0.2
COL21A1Q96P44 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
COL21A1Q96P44 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13.8□□□□□ -0.2
COL21A1Q96P44 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
COL21A1Q96P44 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC13.8□□□□□ -0.2
COL21A1Q96P44 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
COL21A1Q96P44 AL138725.1-201ENST00000407347 1314 ntBASIC13.8□□□□□ -0.2
COL21A1Q96P44 AHCYP2-201ENST00000430630 1300 ntBASIC13.8□□□□□ -0.2
COL21A1Q96P44 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
COL21A1Q96P44 RN7SL832P-201ENST00000607781 1756 ntBASIC13.8□□□□□ -0.2
COL21A1Q96P44 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
COL21A1Q96P44 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms