Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC13.79□□□□□ -0.2
TM9SF4Q92544 HLA-K-203ENST00000430151 1046 ntBASIC13.79□□□□□ -0.2
TM9SF4Q92544 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
TM9SF4Q92544 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC13.79□□□□□ -0.2
TM9SF4Q92544 AC022217.1-201ENST00000521069 738 ntBASIC13.79□□□□□ -0.2
TM9SF4Q92544 HNRNPA1P36-201ENST00000521313 955 ntBASIC13.79□□□□□ -0.2
TM9SF4Q92544 SDHD-202ENST00000525291 790 ntTSL 3 BASIC13.79□□□□□ -0.2
TM9SF4Q92544 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC13.79□□□□□ -0.2
TM9SF4Q92544 AP003171.2-201ENST00000528208 925 ntBASIC13.79□□□□□ -0.2
TM9SF4Q92544 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.79□□□□□ -0.2
TM9SF4Q92544 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
TM9SF4Q92544 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TM9SF4Q92544 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
TM9SF4Q92544 AC016629.1-201ENST00000596579 586 ntBASIC13.79□□□□□ -0.2
TM9SF4Q92544 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC13.79□□□□□ -0.2
TM9SF4Q92544 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC13.79□□□□□ -0.2
TM9SF4Q92544 AL805961.1-203ENST00000641078 1258 ntBASIC13.79□□□□□ -0.2
TM9SF4Q92544 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TM9SF4Q92544 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TM9SF4Q92544 TUBBP5-203ENST00000508529 1334 ntBASIC13.79□□□□□ -0.2
TM9SF4Q92544 AL360270.3-201ENST00000609118 1348 ntBASIC13.79□□□□□ -0.2
TM9SF4Q92544 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
TM9SF4Q92544 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TM9SF4Q92544 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TM9SF4Q92544 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
TM9SF4Q92544 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TM9SF4Q92544 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
TM9SF4Q92544 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TM9SF4Q92544 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TM9SF4Q92544 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TM9SF4Q92544 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TM9SF4Q92544 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.78□□□□□ -0.2
TM9SF4Q92544 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC13.78□□□□□ -0.2
TM9SF4Q92544 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.78□□□□□ -0.2
TM9SF4Q92544 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TM9SF4Q92544 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TM9SF4Q92544 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.78□□□□□ -0.2
TM9SF4Q92544 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.78□□□□□ -0.2
TM9SF4Q92544 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TM9SF4Q92544 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
TM9SF4Q92544 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
TM9SF4Q92544 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
TM9SF4Q92544 AC152010.1-201ENST00000415779 2006 ntBASIC13.78□□□□□ -0.2
TM9SF4Q92544 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TM9SF4Q92544 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.78□□□□□ -0.2
TM9SF4Q92544 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TM9SF4Q92544 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TM9SF4Q92544 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
TM9SF4Q92544 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
TM9SF4Q92544 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TM9SF4Q92544 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TM9SF4Q92544 SDCCAG3P2-201ENST00000326105 1023 ntBASIC13.78□□□□□ -0.2
TM9SF4Q92544 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TM9SF4Q92544 DPM3-202ENST00000368399 517 ntBASIC13.78□□□□□ -0.2
TM9SF4Q92544 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC13.78□□□□□ -0.2
TM9SF4Q92544 HINT2P1-201ENST00000419438 481 ntBASIC13.78□□□□□ -0.2
TM9SF4Q92544 MSRA-203ENST00000441698 788 ntTSL 2 BASIC13.78□□□□□ -0.2
TM9SF4Q92544 AC006335.1-201ENST00000445200 547 ntBASIC13.78□□□□□ -0.2
TM9SF4Q92544 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TM9SF4Q92544 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC13.78□□□□□ -0.2
TM9SF4Q92544 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
TM9SF4Q92544 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC13.78□□□□□ -0.2
TM9SF4Q92544 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC13.78□□□□□ -0.2
TM9SF4Q92544 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TM9SF4Q92544 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
TM9SF4Q92544 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
TM9SF4Q92544 BNIP3P13-201ENST00000599968 566 ntBASIC13.78□□□□□ -0.2
TM9SF4Q92544 AC026740.1-201ENST00000607068 791 ntBASIC13.78□□□□□ -0.2
TM9SF4Q92544 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC13.78□□□□□ -0.2
TM9SF4Q92544 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC13.78□□□□□ -0.2
TM9SF4Q92544 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TM9SF4Q92544 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
TM9SF4Q92544 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TM9SF4Q92544 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
TM9SF4Q92544 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TM9SF4Q92544 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
TM9SF4Q92544 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TM9SF4Q92544 AC107918.4-201ENST00000641966 3141 ntBASIC13.78□□□□□ -0.2
TM9SF4Q92544 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TM9SF4Q92544 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.78□□□□□ -0.2
TM9SF4Q92544 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TM9SF4Q92544 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC13.78□□□□□ -0.2
TM9SF4Q92544 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TM9SF4Q92544 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
TM9SF4Q92544 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TM9SF4Q92544 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TM9SF4Q92544 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TM9SF4Q92544 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TM9SF4Q92544 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
TM9SF4Q92544 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TM9SF4Q92544 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TM9SF4Q92544 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.78□□□□□ -0.2
TM9SF4Q92544 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.78□□□□□ -0.2
TM9SF4Q92544 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
TM9SF4Q92544 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
TM9SF4Q92544 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
TM9SF4Q92544 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
TM9SF4Q92544 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.77□□□□□ -0.2
TM9SF4Q92544 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
TM9SF4Q92544 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 210 ms