Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
STAG1Q8WVM7 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
STAG1Q8WVM7 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
STAG1Q8WVM7 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC17.03■□□□□ 0.32
STAG1Q8WVM7 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC17.03■□□□□ 0.32
STAG1Q8WVM7 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC17.03■□□□□ 0.32
STAG1Q8WVM7 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
STAG1Q8WVM7 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
STAG1Q8WVM7 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
STAG1Q8WVM7 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
STAG1Q8WVM7 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
STAG1Q8WVM7 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC17.03■□□□□ 0.32
STAG1Q8WVM7 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC17.03■□□□□ 0.32
STAG1Q8WVM7 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
STAG1Q8WVM7 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
STAG1Q8WVM7 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
STAG1Q8WVM7 PCDHA3-202ENST00000532566 4594 ntBASIC17.03■□□□□ 0.32
STAG1Q8WVM7 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
STAG1Q8WVM7 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
STAG1Q8WVM7 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
STAG1Q8WVM7 CICP16-201ENST00000502609 2813 ntBASIC17.02■□□□□ 0.32
STAG1Q8WVM7 GOLGA8VP-201ENST00000559009 1798 ntBASIC17.02■□□□□ 0.32
STAG1Q8WVM7 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
STAG1Q8WVM7 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
STAG1Q8WVM7 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
STAG1Q8WVM7 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC17.02■□□□□ 0.32
STAG1Q8WVM7 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
STAG1Q8WVM7 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC17.02■□□□□ 0.32
STAG1Q8WVM7 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
STAG1Q8WVM7 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC17.02■□□□□ 0.32
STAG1Q8WVM7 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.32
STAG1Q8WVM7 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC17.02■□□□□ 0.32
STAG1Q8WVM7 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC17.02■□□□□ 0.32
STAG1Q8WVM7 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
STAG1Q8WVM7 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC17.02■□□□□ 0.32
STAG1Q8WVM7 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC17.02■□□□□ 0.32
STAG1Q8WVM7 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC17.02■□□□□ 0.32
STAG1Q8WVM7 AC012618.1-201ENST00000461223 412 ntBASIC17.02■□□□□ 0.32
STAG1Q8WVM7 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC17.02■□□□□ 0.32
STAG1Q8WVM7 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC17.02■□□□□ 0.32
STAG1Q8WVM7 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC17.02■□□□□ 0.32
STAG1Q8WVM7 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC17.02■□□□□ 0.32
STAG1Q8WVM7 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC17.02■□□□□ 0.32
STAG1Q8WVM7 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC17.02■□□□□ 0.32
STAG1Q8WVM7 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC17.02■□□□□ 0.32
STAG1Q8WVM7 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC17.02■□□□□ 0.32
STAG1Q8WVM7 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.32
STAG1Q8WVM7 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
STAG1Q8WVM7 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
STAG1Q8WVM7 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC17.02■□□□□ 0.32
STAG1Q8WVM7 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
STAG1Q8WVM7 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
STAG1Q8WVM7 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC17.02■□□□□ 0.31
STAG1Q8WVM7 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
STAG1Q8WVM7 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
STAG1Q8WVM7 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
STAG1Q8WVM7 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC17.01■□□□□ 0.31
STAG1Q8WVM7 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC17.01■□□□□ 0.31
STAG1Q8WVM7 AC126755.1-201ENST00000525846 6405 ntBASIC17.01■□□□□ 0.31
STAG1Q8WVM7 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
STAG1Q8WVM7 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
STAG1Q8WVM7 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
STAG1Q8WVM7 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
STAG1Q8WVM7 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
STAG1Q8WVM7 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC17.01■□□□□ 0.31
STAG1Q8WVM7 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
STAG1Q8WVM7 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
STAG1Q8WVM7 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
STAG1Q8WVM7 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
STAG1Q8WVM7 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
STAG1Q8WVM7 NCR3-202ENST00000376071 541 ntTSL 5 BASIC17.01■□□□□ 0.31
STAG1Q8WVM7 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
STAG1Q8WVM7 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
STAG1Q8WVM7 RN7SL720P-201ENST00000488178 304 ntBASIC17.01■□□□□ 0.31
STAG1Q8WVM7 IMP3P2-201ENST00000489760 475 ntBASIC17.01■□□□□ 0.31
STAG1Q8WVM7 RNA5SP423-201ENST00000517127 109 ntBASIC17.01■□□□□ 0.31
STAG1Q8WVM7 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
STAG1Q8WVM7 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC17.01■□□□□ 0.31
STAG1Q8WVM7 RN7SL574P-201ENST00000581512 297 ntBASIC17.01■□□□□ 0.31
STAG1Q8WVM7 AL022334.2-201ENST00000610000 484 ntBASIC17.01■□□□□ 0.31
STAG1Q8WVM7 MEG3_2.1-201ENST00000611456 105 ntBASIC17.01■□□□□ 0.31
STAG1Q8WVM7 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
STAG1Q8WVM7 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
STAG1Q8WVM7 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC17.01■□□□□ 0.31
STAG1Q8WVM7 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
STAG1Q8WVM7 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
STAG1Q8WVM7 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
STAG1Q8WVM7 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
STAG1Q8WVM7 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
STAG1Q8WVM7 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
STAG1Q8WVM7 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
STAG1Q8WVM7 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
STAG1Q8WVM7 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
STAG1Q8WVM7 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
STAG1Q8WVM7 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
STAG1Q8WVM7 TCAM1P-207ENST00000485295 1537 ntBASIC17.01■□□□□ 0.31
STAG1Q8WVM7 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC17.01■□□□□ 0.31
STAG1Q8WVM7 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
STAG1Q8WVM7 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC17■□□□□ 0.31
STAG1Q8WVM7 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms