Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRAF3IP1Q8TDR0 STRCP1-201ENST00000509801 5328 ntBASIC15.22■□□□□ 0.03
TRAF3IP1Q8TDR0 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAF3IP1Q8TDR0 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
TRAF3IP1Q8TDR0 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRAF3IP1Q8TDR0 MST1P2-201ENST00000457982 2291 ntBASIC15.22■□□□□ 0.03
TRAF3IP1Q8TDR0 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
TRAF3IP1Q8TDR0 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRAF3IP1Q8TDR0 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC15.21■□□□□ 0.03
TRAF3IP1Q8TDR0 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAF3IP1Q8TDR0 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRAF3IP1Q8TDR0 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAF3IP1Q8TDR0 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAF3IP1Q8TDR0 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.21■□□□□ 0.03
TRAF3IP1Q8TDR0 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAF3IP1Q8TDR0 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC15.21■□□□□ 0.03
TRAF3IP1Q8TDR0 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC15.21■□□□□ 0.03
TRAF3IP1Q8TDR0 LBX2-201ENST00000341396 886 ntTSL 3 BASIC15.21■□□□□ 0.03
TRAF3IP1Q8TDR0 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAF3IP1Q8TDR0 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRAF3IP1Q8TDR0 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAF3IP1Q8TDR0 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
TRAF3IP1Q8TDR0 COX5BP8-201ENST00000416911 349 ntBASIC15.21■□□□□ 0.03
TRAF3IP1Q8TDR0 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC15.21■□□□□ 0.03
TRAF3IP1Q8TDR0 TAF8-206ENST00000472818 719 ntTSL 2 BASIC15.21■□□□□ 0.03
TRAF3IP1Q8TDR0 AHRR-211ENST00000515206 462 ntTSL 5 BASIC15.21■□□□□ 0.03
TRAF3IP1Q8TDR0 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC15.21■□□□□ 0.03
TRAF3IP1Q8TDR0 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC15.21■□□□□ 0.03
TRAF3IP1Q8TDR0 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRAF3IP1Q8TDR0 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC15.21■□□□□ 0.03
TRAF3IP1Q8TDR0 MIR4683-201ENST00000579659 81 ntBASIC15.21■□□□□ 0.03
TRAF3IP1Q8TDR0 RN7SL713P-201ENST00000582127 302 ntBASIC15.21■□□□□ 0.03
TRAF3IP1Q8TDR0 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRAF3IP1Q8TDR0 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC15.21■□□□□ 0.03
TRAF3IP1Q8TDR0 PFAS-212ENST00000625942 396 ntTSL 5 BASIC15.21■□□□□ 0.03
TRAF3IP1Q8TDR0 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC15.21■□□□□ 0.03
TRAF3IP1Q8TDR0 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC15.21■□□□□ 0.03
TRAF3IP1Q8TDR0 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAF3IP1Q8TDR0 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC15.21■□□□□ 0.03
TRAF3IP1Q8TDR0 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAF3IP1Q8TDR0 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAF3IP1Q8TDR0 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAF3IP1Q8TDR0 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRAF3IP1Q8TDR0 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAF3IP1Q8TDR0 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
TRAF3IP1Q8TDR0 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRAF3IP1Q8TDR0 TCAM1P-207ENST00000485295 1537 ntBASIC15.21■□□□□ 0.03
TRAF3IP1Q8TDR0 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAF3IP1Q8TDR0 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRAF3IP1Q8TDR0 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
TRAF3IP1Q8TDR0 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRAF3IP1Q8TDR0 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
TRAF3IP1Q8TDR0 AC005840.4-201ENST00000541242 2494 ntBASIC15.21■□□□□ 0.02
TRAF3IP1Q8TDR0 AC041040.2-201ENST00000622926 2899 ntBASIC15.21■□□□□ 0.02
TRAF3IP1Q8TDR0 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC15.21■□□□□ 0.02
TRAF3IP1Q8TDR0 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
TRAF3IP1Q8TDR0 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
TRAF3IP1Q8TDR0 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
TRAF3IP1Q8TDR0 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.21■□□□□ 0.02
TRAF3IP1Q8TDR0 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRAF3IP1Q8TDR0 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.02
TRAF3IP1Q8TDR0 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAF3IP1Q8TDR0 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC15.2■□□□□ 0.02
TRAF3IP1Q8TDR0 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAF3IP1Q8TDR0 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAF3IP1Q8TDR0 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAF3IP1Q8TDR0 HPD-204ENST00000543163 1709 ntTSL 5 BASIC15.2■□□□□ 0.02
TRAF3IP1Q8TDR0 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAF3IP1Q8TDR0 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAF3IP1Q8TDR0 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
TRAF3IP1Q8TDR0 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
TRAF3IP1Q8TDR0 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAF3IP1Q8TDR0 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAF3IP1Q8TDR0 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAF3IP1Q8TDR0 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC15.2■□□□□ 0.02
TRAF3IP1Q8TDR0 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC15.2■□□□□ 0.02
TRAF3IP1Q8TDR0 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAF3IP1Q8TDR0 CNN2P8-201ENST00000421872 913 ntBASIC15.2■□□□□ 0.02
TRAF3IP1Q8TDR0 AC112492.5-201ENST00000421897 457 ntBASIC15.2■□□□□ 0.02
TRAF3IP1Q8TDR0 AL035414.1-201ENST00000451327 857 ntBASIC15.2■□□□□ 0.02
TRAF3IP1Q8TDR0 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC15.2■□□□□ 0.02
TRAF3IP1Q8TDR0 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAF3IP1Q8TDR0 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC15.2■□□□□ 0.02
TRAF3IP1Q8TDR0 AP003171.2-201ENST00000528208 925 ntBASIC15.2■□□□□ 0.02
TRAF3IP1Q8TDR0 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC15.2■□□□□ 0.02
TRAF3IP1Q8TDR0 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
TRAF3IP1Q8TDR0 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAF3IP1Q8TDR0 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC15.2■□□□□ 0.02
TRAF3IP1Q8TDR0 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC15.2■□□□□ 0.02
TRAF3IP1Q8TDR0 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TRAF3IP1Q8TDR0 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC15.2■□□□□ 0.02
TRAF3IP1Q8TDR0 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC15.2■□□□□ 0.02
TRAF3IP1Q8TDR0 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC15.2■□□□□ 0.02
TRAF3IP1Q8TDR0 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TRAF3IP1Q8TDR0 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAF3IP1Q8TDR0 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
TRAF3IP1Q8TDR0 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAF3IP1Q8TDR0 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC15.2■□□□□ 0.02
TRAF3IP1Q8TDR0 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
TRAF3IP1Q8TDR0 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms