Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NUP43Q8NFH3 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NUP43Q8NFH3 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NUP43Q8NFH3 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC13.63□□□□□ -0.23
NUP43Q8NFH3 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13.63□□□□□ -0.23
NUP43Q8NFH3 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NUP43Q8NFH3 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NUP43Q8NFH3 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
NUP43Q8NFH3 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.63□□□□□ -0.23
NUP43Q8NFH3 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.63□□□□□ -0.23
NUP43Q8NFH3 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
NUP43Q8NFH3 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NUP43Q8NFH3 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NUP43Q8NFH3 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC13.63□□□□□ -0.23
NUP43Q8NFH3 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NUP43Q8NFH3 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
NUP43Q8NFH3 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NUP43Q8NFH3 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NUP43Q8NFH3 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.63□□□□□ -0.23
NUP43Q8NFH3 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC13.63□□□□□ -0.23
NUP43Q8NFH3 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NUP43Q8NFH3 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC13.63□□□□□ -0.23
NUP43Q8NFH3 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC13.62□□□□□ -0.23
NUP43Q8NFH3 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
NUP43Q8NFH3 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
NUP43Q8NFH3 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NUP43Q8NFH3 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC13.62□□□□□ -0.23
NUP43Q8NFH3 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NUP43Q8NFH3 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC13.62□□□□□ -0.23
NUP43Q8NFH3 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NUP43Q8NFH3 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
NUP43Q8NFH3 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NUP43Q8NFH3 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
NUP43Q8NFH3 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
NUP43Q8NFH3 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NUP43Q8NFH3 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
NUP43Q8NFH3 AC126335.2-201ENST00000623362 4637 ntBASIC13.62□□□□□ -0.23
NUP43Q8NFH3 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
NUP43Q8NFH3 ANKRD19P-201ENST00000338192 862 ntBASIC13.62□□□□□ -0.23
NUP43Q8NFH3 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NUP43Q8NFH3 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC13.62□□□□□ -0.23
NUP43Q8NFH3 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC13.62□□□□□ -0.23
NUP43Q8NFH3 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC13.62□□□□□ -0.23
NUP43Q8NFH3 AC100850.1-201ENST00000506768 649 ntBASIC13.62□□□□□ -0.23
NUP43Q8NFH3 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC13.62□□□□□ -0.23
NUP43Q8NFH3 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC13.62□□□□□ -0.23
NUP43Q8NFH3 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC13.62□□□□□ -0.23
NUP43Q8NFH3 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC13.62□□□□□ -0.23
NUP43Q8NFH3 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
NUP43Q8NFH3 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC13.62□□□□□ -0.23
NUP43Q8NFH3 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NUP43Q8NFH3 AC132192.2-201ENST00000596206 1147 ntBASIC13.62□□□□□ -0.23
NUP43Q8NFH3 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
NUP43Q8NFH3 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NUP43Q8NFH3 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NUP43Q8NFH3 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
NUP43Q8NFH3 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
NUP43Q8NFH3 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NUP43Q8NFH3 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NUP43Q8NFH3 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NUP43Q8NFH3 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NUP43Q8NFH3 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC13.62□□□□□ -0.23
NUP43Q8NFH3 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NUP43Q8NFH3 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC13.62□□□□□ -0.23
NUP43Q8NFH3 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
NUP43Q8NFH3 AC063926.2-201ENST00000623766 1308 ntBASIC13.62□□□□□ -0.23
NUP43Q8NFH3 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
NUP43Q8NFH3 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NUP43Q8NFH3 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NUP43Q8NFH3 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NUP43Q8NFH3 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NUP43Q8NFH3 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.62□□□□□ -0.23
NUP43Q8NFH3 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NUP43Q8NFH3 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC13.61□□□□□ -0.23
NUP43Q8NFH3 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC13.61□□□□□ -0.23
NUP43Q8NFH3 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
NUP43Q8NFH3 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NUP43Q8NFH3 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NUP43Q8NFH3 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NUP43Q8NFH3 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.61□□□□□ -0.23
NUP43Q8NFH3 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC13.61□□□□□ -0.23
NUP43Q8NFH3 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NUP43Q8NFH3 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC13.61□□□□□ -0.23
NUP43Q8NFH3 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NUP43Q8NFH3 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
NUP43Q8NFH3 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NUP43Q8NFH3 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NUP43Q8NFH3 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NUP43Q8NFH3 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NUP43Q8NFH3 TPO-206ENST00000382269 1155 ntTSL 5 BASIC13.61□□□□□ -0.23
NUP43Q8NFH3 MIR1909-201ENST00000411312 80 ntBASIC13.61□□□□□ -0.23
NUP43Q8NFH3 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC13.61□□□□□ -0.23
NUP43Q8NFH3 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC13.61□□□□□ -0.23
NUP43Q8NFH3 ACA64.2-201ENST00000459014 129 ntBASIC13.61□□□□□ -0.23
NUP43Q8NFH3 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC13.61□□□□□ -0.23
NUP43Q8NFH3 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
NUP43Q8NFH3 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC13.61□□□□□ -0.23
NUP43Q8NFH3 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC13.61□□□□□ -0.23
NUP43Q8NFH3 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
NUP43Q8NFH3 SNX29P1-201ENST00000548357 1007 ntBASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms