Protein–RNA interactions for Protein: Q8NEP7

KLHDC9, Kelch domain-containing protein 9, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC9Q8NEP7 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
KLHDC9Q8NEP7 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
KLHDC9Q8NEP7 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
KLHDC9Q8NEP7 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
KLHDC9Q8NEP7 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KLHDC9Q8NEP7 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KLHDC9Q8NEP7 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KLHDC9Q8NEP7 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KLHDC9Q8NEP7 TBC1D27-202ENST00000424239 1573 ntBASIC15.71■□□□□ 0.11
KLHDC9Q8NEP7 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.71■□□□□ 0.11
KLHDC9Q8NEP7 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
KLHDC9Q8NEP7 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.71■□□□□ 0.11
KLHDC9Q8NEP7 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.71■□□□□ 0.11
KLHDC9Q8NEP7 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KLHDC9Q8NEP7 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
KLHDC9Q8NEP7 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KLHDC9Q8NEP7 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
KLHDC9Q8NEP7 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
KLHDC9Q8NEP7 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KLHDC9Q8NEP7 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
KLHDC9Q8NEP7 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
KLHDC9Q8NEP7 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
KLHDC9Q8NEP7 RPL3P2-204ENST00000413027 1203 ntBASIC15.71■□□□□ 0.11
KLHDC9Q8NEP7 AC073210.1-201ENST00000414799 232 ntBASIC15.71■□□□□ 0.11
KLHDC9Q8NEP7 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
KLHDC9Q8NEP7 KRT18P4-201ENST00000422599 1288 ntBASIC15.71■□□□□ 0.11
KLHDC9Q8NEP7 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC15.71■□□□□ 0.11
KLHDC9Q8NEP7 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC15.71■□□□□ 0.11
KLHDC9Q8NEP7 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KLHDC9Q8NEP7 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
KLHDC9Q8NEP7 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KLHDC9Q8NEP7 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC15.71■□□□□ 0.11
KLHDC9Q8NEP7 DGAT2L7P-201ENST00000602462 744 ntBASIC15.71■□□□□ 0.11
KLHDC9Q8NEP7 AL136982.5-201ENST00000605222 294 ntBASIC15.71■□□□□ 0.11
KLHDC9Q8NEP7 TP53-221ENST00000615910 1149 ntTSL 5 BASIC15.71■□□□□ 0.11
KLHDC9Q8NEP7 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC15.71■□□□□ 0.11
KLHDC9Q8NEP7 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC15.71■□□□□ 0.11
KLHDC9Q8NEP7 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC15.71■□□□□ 0.11
KLHDC9Q8NEP7 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
KLHDC9Q8NEP7 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KLHDC9Q8NEP7 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.71■□□□□ 0.11
KLHDC9Q8NEP7 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KLHDC9Q8NEP7 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC15.71■□□□□ 0.11
KLHDC9Q8NEP7 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
KLHDC9Q8NEP7 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
KLHDC9Q8NEP7 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
KLHDC9Q8NEP7 AC092384.3-202ENST00000564646 2873 ntBASIC15.71■□□□□ 0.11
KLHDC9Q8NEP7 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC15.71■□□□□ 0.11
KLHDC9Q8NEP7 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
KLHDC9Q8NEP7 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.71■□□□□ 0.1
KLHDC9Q8NEP7 AC232323.1-201ENST00000540724 2099 ntBASIC15.71■□□□□ 0.1
KLHDC9Q8NEP7 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
KLHDC9Q8NEP7 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KLHDC9Q8NEP7 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KLHDC9Q8NEP7 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KLHDC9Q8NEP7 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.7■□□□□ 0.1
KLHDC9Q8NEP7 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.7■□□□□ 0.1
KLHDC9Q8NEP7 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KLHDC9Q8NEP7 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KLHDC9Q8NEP7 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.7■□□□□ 0.1
KLHDC9Q8NEP7 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KLHDC9Q8NEP7 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
KLHDC9Q8NEP7 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.7■□□□□ 0.1
KLHDC9Q8NEP7 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KLHDC9Q8NEP7 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
KLHDC9Q8NEP7 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KLHDC9Q8NEP7 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
KLHDC9Q8NEP7 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC15.7■□□□□ 0.1
KLHDC9Q8NEP7 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC15.7■□□□□ 0.1
KLHDC9Q8NEP7 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC15.7■□□□□ 0.1
KLHDC9Q8NEP7 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC15.7■□□□□ 0.1
KLHDC9Q8NEP7 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC15.7■□□□□ 0.1
KLHDC9Q8NEP7 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
KLHDC9Q8NEP7 F11R-204ENST00000537746 1245 ntTSL 2 BASIC15.7■□□□□ 0.1
KLHDC9Q8NEP7 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC15.7■□□□□ 0.1
KLHDC9Q8NEP7 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC15.7■□□□□ 0.1
KLHDC9Q8NEP7 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC15.7■□□□□ 0.1
KLHDC9Q8NEP7 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC15.7■□□□□ 0.1
KLHDC9Q8NEP7 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
KLHDC9Q8NEP7 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
KLHDC9Q8NEP7 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.7■□□□□ 0.1
KLHDC9Q8NEP7 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
KLHDC9Q8NEP7 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
KLHDC9Q8NEP7 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC15.7■□□□□ 0.1
KLHDC9Q8NEP7 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KLHDC9Q8NEP7 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC15.7■□□□□ 0.1
KLHDC9Q8NEP7 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.7■□□□□ 0.1
KLHDC9Q8NEP7 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KLHDC9Q8NEP7 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC15.7■□□□□ 0.1
KLHDC9Q8NEP7 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
KLHDC9Q8NEP7 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
KLHDC9Q8NEP7 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KLHDC9Q8NEP7 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
KLHDC9Q8NEP7 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
KLHDC9Q8NEP7 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
KLHDC9Q8NEP7 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
KLHDC9Q8NEP7 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
KLHDC9Q8NEP7 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
KLHDC9Q8NEP7 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
KLHDC9Q8NEP7 AC117503.4-201ENST00000623229 1418 ntBASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms