Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ZNF546Q86UE3 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC12.13□□□□□ -0.47
ZNF546Q86UE3 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC12.13□□□□□ -0.47
ZNF546Q86UE3 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ZNF546Q86UE3 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ZNF546Q86UE3 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ZNF546Q86UE3 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ZNF546Q86UE3 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
ZNF546Q86UE3 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC12.13□□□□□ -0.47
ZNF546Q86UE3 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ZNF546Q86UE3 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ZNF546Q86UE3 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ZNF546Q86UE3 FAM58CP-201ENST00000435741 640 ntBASIC12.13□□□□□ -0.47
ZNF546Q86UE3 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ZNF546Q86UE3 AL591424.1-201ENST00000442569 1213 ntBASIC12.13□□□□□ -0.47
ZNF546Q86UE3 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC12.13□□□□□ -0.47
ZNF546Q86UE3 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC12.13□□□□□ -0.47
ZNF546Q86UE3 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC12.13□□□□□ -0.47
ZNF546Q86UE3 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ZNF546Q86UE3 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC12.13□□□□□ -0.47
ZNF546Q86UE3 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
ZNF546Q86UE3 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC12.13□□□□□ -0.47
ZNF546Q86UE3 SLC25A6P4-201ENST00000586535 553 ntBASIC12.13□□□□□ -0.47
ZNF546Q86UE3 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC12.13□□□□□ -0.47
ZNF546Q86UE3 AC026120.1-201ENST00000611536 926 ntBASIC12.13□□□□□ -0.47
ZNF546Q86UE3 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC12.13□□□□□ -0.47
ZNF546Q86UE3 GPR39-203ENST00000622084 900 ntTSL 5 BASIC12.13□□□□□ -0.47
ZNF546Q86UE3 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ZNF546Q86UE3 TRPC6-201ENST00000344327 4612 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ZNF546Q86UE3 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC12.13□□□□□ -0.47
ZNF546Q86UE3 FAM76A-204ENST00000373954 3567 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
ZNF546Q86UE3 ADCY7-202ENST00000394697 6213 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
ZNF546Q86UE3 MARK2P9-201ENST00000430958 1727 ntBASIC12.13□□□□□ -0.47
ZNF546Q86UE3 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC12.13□□□□□ -0.47
ZNF546Q86UE3 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ZNF546Q86UE3 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ZNF546Q86UE3 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
ZNF546Q86UE3 AC060814.4-201ENST00000594169 2163 ntBASIC12.13□□□□□ -0.47
ZNF546Q86UE3 AC010970.1-201ENST00000445125 1848 ntBASIC12.13□□□□□ -0.47
ZNF546Q86UE3 KCNN1-201ENST00000222249 3625 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
ZNF546Q86UE3 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ZNF546Q86UE3 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
ZNF546Q86UE3 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC12.13□□□□□ -0.47
ZNF546Q86UE3 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
ZNF546Q86UE3 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC12.13□□□□□ -0.47
ZNF546Q86UE3 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ZNF546Q86UE3 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC12.13□□□□□ -0.47
ZNF546Q86UE3 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ZNF546Q86UE3 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
ZNF546Q86UE3 HTR2C-201ENST00000276198 4751 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ZNF546Q86UE3 GUCY1B3-204ENST00000505154 2316 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ZNF546Q86UE3 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
ZNF546Q86UE3 TUBB8P4-201ENST00000511806 1324 ntBASIC12.12□□□□□ -0.47
ZNF546Q86UE3 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
ZNF546Q86UE3 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ZNF546Q86UE3 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ZNF546Q86UE3 KRT8P14-201ENST00000414254 1442 ntBASIC12.12□□□□□ -0.47
ZNF546Q86UE3 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ZNF546Q86UE3 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ZNF546Q86UE3 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ZNF546Q86UE3 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ZNF546Q86UE3 UXT-AS1-201ENST00000590504 1525 ntBASIC12.12□□□□□ -0.47
ZNF546Q86UE3 PCMTD1-208ENST00000544451 3697 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ZNF546Q86UE3 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ZNF546Q86UE3 PLCB3-201ENST00000279230 4197 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ZNF546Q86UE3 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ZNF546Q86UE3 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
ZNF546Q86UE3 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
ZNF546Q86UE3 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ZNF546Q86UE3 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ZNF546Q86UE3 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC12.12□□□□□ -0.47
ZNF546Q86UE3 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ZNF546Q86UE3 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC12.12□□□□□ -0.47
ZNF546Q86UE3 ADH5P3-201ENST00000433842 1137 ntBASIC12.12□□□□□ -0.47
ZNF546Q86UE3 HIST3H2BA-201ENST00000436555 524 ntBASIC12.12□□□□□ -0.47
ZNF546Q86UE3 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
ZNF546Q86UE3 AC004066.1-201ENST00000502488 802 ntBASIC12.12□□□□□ -0.47
ZNF546Q86UE3 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ZNF546Q86UE3 AC079140.1-201ENST00000508039 487 ntBASIC12.12□□□□□ -0.47
ZNF546Q86UE3 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC12.12□□□□□ -0.47
ZNF546Q86UE3 AC243562.1-201ENST00000560672 389 ntBASIC12.12□□□□□ -0.47
ZNF546Q86UE3 RARRES2P9-201ENST00000565168 469 ntBASIC12.12□□□□□ -0.47
ZNF546Q86UE3 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC12.12□□□□□ -0.47
ZNF546Q86UE3 AC055717.3-201ENST00000622967 595 ntBASIC12.12□□□□□ -0.47
ZNF546Q86UE3 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ZNF546Q86UE3 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC12.12□□□□□ -0.47
ZNF546Q86UE3 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
ZNF546Q86UE3 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC12.12□□□□□ -0.47
ZNF546Q86UE3 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ZNF546Q86UE3 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC12.12□□□□□ -0.47
ZNF546Q86UE3 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC12.12□□□□□ -0.47
ZNF546Q86UE3 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ZNF546Q86UE3 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ZNF546Q86UE3 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
ZNF546Q86UE3 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ZNF546Q86UE3 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
ZNF546Q86UE3 DYSF-206ENST00000409744 6564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
ZNF546Q86UE3 DYSF-209ENST00000410041 6594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
ZNF546Q86UE3 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC12.12□□□□□ -0.47
ZNF546Q86UE3 MSH6-214ENST00000616033 3429 ntTSL 5 BASIC12.12□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms