Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HERC4Q5GLZ8 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HERC4Q5GLZ8 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HERC4Q5GLZ8 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HERC4Q5GLZ8 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
HERC4Q5GLZ8 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HERC4Q5GLZ8 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
HERC4Q5GLZ8 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC16.3■□□□□ 0.2
HERC4Q5GLZ8 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HERC4Q5GLZ8 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HERC4Q5GLZ8 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HERC4Q5GLZ8 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HERC4Q5GLZ8 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HERC4Q5GLZ8 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
HERC4Q5GLZ8 AC015818.8-201ENST00000587907 1519 ntBASIC16.29■□□□□ 0.2
HERC4Q5GLZ8 AC011498.7-201ENST00000624986 2027 ntBASIC16.29■□□□□ 0.2
HERC4Q5GLZ8 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HERC4Q5GLZ8 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
HERC4Q5GLZ8 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HERC4Q5GLZ8 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HERC4Q5GLZ8 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
HERC4Q5GLZ8 KRT8P28-201ENST00000433288 1390 ntBASIC16.29■□□□□ 0.2
HERC4Q5GLZ8 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HERC4Q5GLZ8 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HERC4Q5GLZ8 SHC1P1-201ENST00000425230 1745 ntBASIC16.29■□□□□ 0.2
HERC4Q5GLZ8 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HERC4Q5GLZ8 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HERC4Q5GLZ8 MPV17-204ENST00000399052 749 ntTSL 4 BASIC16.29■□□□□ 0.2
HERC4Q5GLZ8 KRTAP19-9P-201ENST00000421795 191 ntBASIC16.29■□□□□ 0.2
HERC4Q5GLZ8 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC16.29■□□□□ 0.2
HERC4Q5GLZ8 AL035414.1-201ENST00000451327 857 ntBASIC16.29■□□□□ 0.2
HERC4Q5GLZ8 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HERC4Q5GLZ8 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC16.29■□□□□ 0.2
HERC4Q5GLZ8 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC16.29■□□□□ 0.2
HERC4Q5GLZ8 NCK2-206ENST00000522586 490 ntTSL 5 BASIC16.29■□□□□ 0.2
HERC4Q5GLZ8 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC16.29■□□□□ 0.2
HERC4Q5GLZ8 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HERC4Q5GLZ8 AC097724.1-201ENST00000609581 426 ntBASIC16.29■□□□□ 0.2
HERC4Q5GLZ8 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
HERC4Q5GLZ8 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HERC4Q5GLZ8 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
HERC4Q5GLZ8 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC16.29■□□□□ 0.2
HERC4Q5GLZ8 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HERC4Q5GLZ8 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
HERC4Q5GLZ8 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
HERC4Q5GLZ8 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
HERC4Q5GLZ8 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC16.29■□□□□ 0.2
HERC4Q5GLZ8 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HERC4Q5GLZ8 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HERC4Q5GLZ8 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HERC4Q5GLZ8 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HERC4Q5GLZ8 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
HERC4Q5GLZ8 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
HERC4Q5GLZ8 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC16.29■□□□□ 0.2
HERC4Q5GLZ8 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
HERC4Q5GLZ8 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
HERC4Q5GLZ8 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
HERC4Q5GLZ8 FUK-202ENST00000378912 3925 ntTSL 2 BASIC16.28■□□□□ 0.2
HERC4Q5GLZ8 R3HDM2P2-201ENST00000401880 2116 ntBASIC16.28■□□□□ 0.2
HERC4Q5GLZ8 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
HERC4Q5GLZ8 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC16.28■□□□□ 0.2
HERC4Q5GLZ8 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC16.28■□□□□ 0.2
HERC4Q5GLZ8 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HERC4Q5GLZ8 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HERC4Q5GLZ8 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HERC4Q5GLZ8 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HERC4Q5GLZ8 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
HERC4Q5GLZ8 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HERC4Q5GLZ8 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC16.28■□□□□ 0.2
HERC4Q5GLZ8 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HERC4Q5GLZ8 HLA-DQB2-229ENST00000411527 1059 ntBASIC16.28■□□□□ 0.2
HERC4Q5GLZ8 AC010141.1-201ENST00000411585 623 ntBASIC16.28■□□□□ 0.2
HERC4Q5GLZ8 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HERC4Q5GLZ8 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC16.28■□□□□ 0.2
HERC4Q5GLZ8 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC16.28■□□□□ 0.2
HERC4Q5GLZ8 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
HERC4Q5GLZ8 PTPA-218ENST00000435132 618 ntTSL 2 BASIC16.28■□□□□ 0.2
HERC4Q5GLZ8 FTLP1-201ENST00000449155 526 ntBASIC16.28■□□□□ 0.2
HERC4Q5GLZ8 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HERC4Q5GLZ8 RN7SL720P-201ENST00000488178 304 ntBASIC16.28■□□□□ 0.2
HERC4Q5GLZ8 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
HERC4Q5GLZ8 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
HERC4Q5GLZ8 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC16.28■□□□□ 0.2
HERC4Q5GLZ8 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC16.28■□□□□ 0.2
HERC4Q5GLZ8 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC16.28■□□□□ 0.2
HERC4Q5GLZ8 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC16.28■□□□□ 0.2
HERC4Q5GLZ8 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
HERC4Q5GLZ8 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
HERC4Q5GLZ8 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC16.28■□□□□ 0.2
HERC4Q5GLZ8 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HERC4Q5GLZ8 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
HERC4Q5GLZ8 WARS-203ENST00000358655 2466 ntTSL 2 BASIC16.28■□□□□ 0.2
HERC4Q5GLZ8 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HERC4Q5GLZ8 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
HERC4Q5GLZ8 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HERC4Q5GLZ8 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
HERC4Q5GLZ8 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC16.28■□□□□ 0.2
HERC4Q5GLZ8 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HERC4Q5GLZ8 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC16.28■□□□□ 0.2
HERC4Q5GLZ8 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms