Protein–RNA interactions for Protein: Q12772

SREBF2, Sterol regulatory element-binding protein 2, humanhuman

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2Q12772 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SREBF2Q12772 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SREBF2Q12772 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SREBF2Q12772 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC16.3■□□□□ 0.2
SREBF2Q12772 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SREBF2Q12772 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SREBF2Q12772 PCDHA1-201ENST00000378133 2726 ntBASIC16.3■□□□□ 0.2
SREBF2Q12772 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SREBF2Q12772 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.3■□□□□ 0.2
SREBF2Q12772 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SREBF2Q12772 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SREBF2Q12772 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC16.3■□□□□ 0.2
SREBF2Q12772 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
SREBF2Q12772 KRT8P43-201ENST00000406052 1458 ntBASIC16.29■□□□□ 0.2
SREBF2Q12772 RPL13AP3-202ENST00000494676 1473 ntBASIC16.29■□□□□ 0.2
SREBF2Q12772 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SREBF2Q12772 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SREBF2Q12772 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SREBF2Q12772 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.29■□□□□ 0.2
SREBF2Q12772 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
SREBF2Q12772 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SREBF2Q12772 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SREBF2Q12772 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SREBF2Q12772 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.29■□□□□ 0.2
SREBF2Q12772 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SREBF2Q12772 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SREBF2Q12772 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SREBF2Q12772 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SREBF2Q12772 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SREBF2Q12772 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.29■□□□□ 0.2
SREBF2Q12772 DHRS7C-201ENST00000330255 1006 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SREBF2Q12772 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SREBF2Q12772 VASH2-205ENST00000366967 1206 ntTSL 2 BASIC16.29■□□□□ 0.2
SREBF2Q12772 DYNLT1-201ENST00000367085 774 ntTSL 2 BASIC16.29■□□□□ 0.2
SREBF2Q12772 KRTAP2-3-201ENST00000391418 875 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
SREBF2Q12772 HNRNPA1P21-201ENST00000424115 961 ntBASIC16.29■□□□□ 0.2
SREBF2Q12772 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC16.29■□□□□ 0.2
SREBF2Q12772 MED19-202ENST00000431606 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SREBF2Q12772 AL773545.2-201ENST00000442149 472 ntBASIC16.29■□□□□ 0.2
SREBF2Q12772 KRT19P4-201ENST00000443208 943 ntBASIC16.29■□□□□ 0.2
SREBF2Q12772 AC103923.1-201ENST00000453229 1228 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SREBF2Q12772 TMEM14B-215ENST00000481240 1032 ntTSL 2 BASIC16.29■□□□□ 0.2
SREBF2Q12772 GPX3-202ENST00000517973 612 ntTSL 3 BASIC16.29■□□□□ 0.2
SREBF2Q12772 BLOC1S5-205ENST00000543936 368 ntTSL 2 BASIC16.29■□□□□ 0.2
SREBF2Q12772 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC16.29■□□□□ 0.2
SREBF2Q12772 BMF-206ENST00000558774 671 ntTSL 3 BASIC16.29■□□□□ 0.2
SREBF2Q12772 TRAPPC2L-212ENST00000567312 499 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SREBF2Q12772 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC16.29■□□□□ 0.2
SREBF2Q12772 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC16.29■□□□□ 0.2
SREBF2Q12772 AP001094.3-201ENST00000580491 616 ntTSL 2 BASIC16.29■□□□□ 0.2
SREBF2Q12772 RN7SL455P-201ENST00000580629 282 ntBASIC16.29■□□□□ 0.2
SREBF2Q12772 PRMT1P1-201ENST00000604252 1009 ntBASIC16.29■□□□□ 0.2
SREBF2Q12772 CSTP2-201ENST00000610599 398 ntBASIC16.29■□□□□ 0.2
SREBF2Q12772 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SREBF2Q12772 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SREBF2Q12772 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.29■□□□□ 0.2
SREBF2Q12772 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
SREBF2Q12772 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SREBF2Q12772 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC16.29■□□□□ 0.2
SREBF2Q12772 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SREBF2Q12772 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
SREBF2Q12772 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SREBF2Q12772 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SREBF2Q12772 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SREBF2Q12772 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.28■□□□□ 0.2
SREBF2Q12772 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SREBF2Q12772 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC16.28■□□□□ 0.2
SREBF2Q12772 APOBEC3A-201ENST00000249116 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SREBF2Q12772 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.28■□□□□ 0.2
SREBF2Q12772 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC16.28■□□□□ 0.2
SREBF2Q12772 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SREBF2Q12772 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SREBF2Q12772 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.28■□□□□ 0.2
SREBF2Q12772 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SREBF2Q12772 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
SREBF2Q12772 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SREBF2Q12772 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
SREBF2Q12772 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SREBF2Q12772 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SREBF2Q12772 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SREBF2Q12772 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SREBF2Q12772 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SREBF2Q12772 CAMP-201ENST00000296435 745 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SREBF2Q12772 CCL25-202ENST00000315626 450 ntTSL 2 BASIC16.28■□□□□ 0.2
SREBF2Q12772 HDGF-202ENST00000368206 960 ntTSL 5 BASIC16.28■□□□□ 0.2
SREBF2Q12772 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SREBF2Q12772 AC098657.1-201ENST00000416270 1135 ntBASIC16.28■□□□□ 0.2
SREBF2Q12772 FAM197Y6-201ENST00000420524 766 ntBASIC16.28■□□□□ 0.2
SREBF2Q12772 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC16.28■□□□□ 0.2
SREBF2Q12772 RHOQP2-201ENST00000449922 579 ntBASIC16.28■□□□□ 0.2
SREBF2Q12772 TBC1D3P6-201ENST00000505954 962 ntBASIC16.28■□□□□ 0.2
SREBF2Q12772 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC16.28■□□□□ 0.2
SREBF2Q12772 AC079779.4-201ENST00000619113 548 ntTSL 5 BASIC16.28■□□□□ 0.2
SREBF2Q12772 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SREBF2Q12772 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SREBF2Q12772 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
SREBF2Q12772 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.28■□□□□ 0.2
SREBF2Q12772 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SREBF2Q12772 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SREBF2Q12772 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms