Protein–RNA interactions for Protein: Q03692

COL10A1, Collagen alpha-1(X) chain, humanhuman

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL10A1Q03692 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
COL10A1Q03692 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
COL10A1Q03692 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
COL10A1Q03692 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
COL10A1Q03692 RN7SL832P-201ENST00000607781 1756 ntBASIC12.35□□□□□ -0.43
COL10A1Q03692 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
COL10A1Q03692 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC12.35□□□□□ -0.43
COL10A1Q03692 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
COL10A1Q03692 AC005562.1-201ENST00000583030 3219 ntBASIC12.35□□□□□ -0.43
COL10A1Q03692 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
COL10A1Q03692 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
COL10A1Q03692 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
COL10A1Q03692 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC12.35□□□□□ -0.43
COL10A1Q03692 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
COL10A1Q03692 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
COL10A1Q03692 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
COL10A1Q03692 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC12.34□□□□□ -0.43
COL10A1Q03692 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
COL10A1Q03692 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
COL10A1Q03692 ADAMTS7P1-201ENST00000613213 4793 ntBASIC12.34□□□□□ -0.43
COL10A1Q03692 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
COL10A1Q03692 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
COL10A1Q03692 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
COL10A1Q03692 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC12.34□□□□□ -0.43
COL10A1Q03692 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
COL10A1Q03692 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
COL10A1Q03692 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
COL10A1Q03692 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
COL10A1Q03692 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
COL10A1Q03692 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
COL10A1Q03692 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
COL10A1Q03692 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC12.34□□□□□ -0.43
COL10A1Q03692 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
COL10A1Q03692 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC12.34□□□□□ -0.43
COL10A1Q03692 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
COL10A1Q03692 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC12.34□□□□□ -0.43
COL10A1Q03692 KHSRPP1-201ENST00000427983 1768 ntBASIC12.34□□□□□ -0.43
COL10A1Q03692 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC12.34□□□□□ -0.43
COL10A1Q03692 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
COL10A1Q03692 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
COL10A1Q03692 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
COL10A1Q03692 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
COL10A1Q03692 GZMB-202ENST00000382540 816 ntTSL 5 BASIC12.34□□□□□ -0.43
COL10A1Q03692 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
COL10A1Q03692 AL136309.1-201ENST00000403917 691 ntBASIC12.34□□□□□ -0.43
COL10A1Q03692 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
COL10A1Q03692 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC12.34□□□□□ -0.43
COL10A1Q03692 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC12.34□□□□□ -0.43
COL10A1Q03692 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
COL10A1Q03692 KLF2P4-201ENST00000451959 1225 ntBASIC12.34□□□□□ -0.43
COL10A1Q03692 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
COL10A1Q03692 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC12.34□□□□□ -0.43
COL10A1Q03692 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC12.34□□□□□ -0.43
COL10A1Q03692 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
COL10A1Q03692 AP000812.2-201ENST00000538934 718 ntBASIC12.34□□□□□ -0.43
COL10A1Q03692 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
COL10A1Q03692 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC12.34□□□□□ -0.43
COL10A1Q03692 RAB43P1-201ENST00000561790 589 ntBASIC12.34□□□□□ -0.43
COL10A1Q03692 AC106886.1-201ENST00000568660 600 ntBASIC12.34□□□□□ -0.43
COL10A1Q03692 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC12.34□□□□□ -0.43
COL10A1Q03692 AL162274.1-201ENST00000617191 1098 ntBASIC12.34□□□□□ -0.43
COL10A1Q03692 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
COL10A1Q03692 MVK-217ENST00000639206 367 ntTSL 5 BASIC12.34□□□□□ -0.43
COL10A1Q03692 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
COL10A1Q03692 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
COL10A1Q03692 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
COL10A1Q03692 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC12.34□□□□□ -0.43
COL10A1Q03692 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
COL10A1Q03692 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC12.34□□□□□ -0.43
COL10A1Q03692 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
COL10A1Q03692 Z82170.1-201ENST00000625081 3192 ntBASIC12.34□□□□□ -0.43
COL10A1Q03692 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC12.34□□□□□ -0.43
COL10A1Q03692 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
COL10A1Q03692 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
COL10A1Q03692 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC12.34□□□□□ -0.43
COL10A1Q03692 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC12.34□□□□□ -0.43
COL10A1Q03692 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
COL10A1Q03692 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
COL10A1Q03692 ADK-205ENST00000539909 1866 ntTSL 2 BASIC12.34□□□□□ -0.43
COL10A1Q03692 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
COL10A1Q03692 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC12.33□□□□□ -0.43
COL10A1Q03692 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
COL10A1Q03692 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
COL10A1Q03692 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
COL10A1Q03692 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC12.33□□□□□ -0.43
COL10A1Q03692 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC12.33□□□□□ -0.44
COL10A1Q03692 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
COL10A1Q03692 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC12.33□□□□□ -0.44
COL10A1Q03692 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
COL10A1Q03692 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
COL10A1Q03692 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
COL10A1Q03692 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
COL10A1Q03692 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC12.33□□□□□ -0.44
COL10A1Q03692 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
COL10A1Q03692 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC12.33□□□□□ -0.44
COL10A1Q03692 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC12.33□□□□□ -0.44
COL10A1Q03692 AC090505.1-201ENST00000430515 1834 ntBASIC12.33□□□□□ -0.44
COL10A1Q03692 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC12.33□□□□□ -0.44
COL10A1Q03692 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
COL10A1Q03692 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms