Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
IRX4P78413 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
IRX4P78413 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
IRX4P78413 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC15.26■□□□□ 0.03
IRX4P78413 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
IRX4P78413 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
IRX4P78413 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
IRX4P78413 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC15.25■□□□□ 0.03
IRX4P78413 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
IRX4P78413 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
IRX4P78413 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
IRX4P78413 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
IRX4P78413 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC15.25■□□□□ 0.03
IRX4P78413 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
IRX4P78413 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
IRX4P78413 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.25■□□□□ 0.03
IRX4P78413 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
IRX4P78413 AC010327.5-201ENST00000586923 3061 ntBASIC15.25■□□□□ 0.03
IRX4P78413 AC091046.1-201ENST00000331871 207 ntBASIC15.25■□□□□ 0.03
IRX4P78413 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
IRX4P78413 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
IRX4P78413 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
IRX4P78413 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
IRX4P78413 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC15.25■□□□□ 0.03
IRX4P78413 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC15.25■□□□□ 0.03
IRX4P78413 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC15.25■□□□□ 0.03
IRX4P78413 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.25■□□□□ 0.03
IRX4P78413 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
IRX4P78413 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
IRX4P78413 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
IRX4P78413 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC15.25■□□□□ 0.03
IRX4P78413 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC15.25■□□□□ 0.03
IRX4P78413 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
IRX4P78413 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
IRX4P78413 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC15.25■□□□□ 0.03
IRX4P78413 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC15.25■□□□□ 0.03
IRX4P78413 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
IRX4P78413 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
IRX4P78413 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
IRX4P78413 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
IRX4P78413 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC15.25■□□□□ 0.03
IRX4P78413 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
IRX4P78413 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
IRX4P78413 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
IRX4P78413 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
IRX4P78413 AL928921.2-201ENST00000641325 2442 ntBASIC15.25■□□□□ 0.03
IRX4P78413 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
IRX4P78413 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
IRX4P78413 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC15.25■□□□□ 0.03
IRX4P78413 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC15.25■□□□□ 0.03
IRX4P78413 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
IRX4P78413 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
IRX4P78413 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
IRX4P78413 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
IRX4P78413 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC15.24■□□□□ 0.03
IRX4P78413 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
IRX4P78413 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
IRX4P78413 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
IRX4P78413 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
IRX4P78413 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
IRX4P78413 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
IRX4P78413 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
IRX4P78413 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
IRX4P78413 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
IRX4P78413 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC15.24■□□□□ 0.03
IRX4P78413 CYP46A4P-201ENST00000414953 267 ntBASIC15.24■□□□□ 0.03
IRX4P78413 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC15.24■□□□□ 0.03
IRX4P78413 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC15.24■□□□□ 0.03
IRX4P78413 CNN2P10-201ENST00000443067 918 ntBASIC15.24■□□□□ 0.03
IRX4P78413 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
IRX4P78413 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
IRX4P78413 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC15.24■□□□□ 0.03
IRX4P78413 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC15.24■□□□□ 0.03
IRX4P78413 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC15.24■□□□□ 0.03
IRX4P78413 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC15.24■□□□□ 0.03
IRX4P78413 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.24■□□□□ 0.03
IRX4P78413 AL359183.1-201ENST00000623796 2132 ntBASIC15.24■□□□□ 0.03
IRX4P78413 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
IRX4P78413 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
IRX4P78413 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
IRX4P78413 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
IRX4P78413 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
IRX4P78413 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
IRX4P78413 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.24■□□□□ 0.03
IRX4P78413 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
IRX4P78413 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC15.24■□□□□ 0.03
IRX4P78413 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
IRX4P78413 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
IRX4P78413 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
IRX4P78413 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC15.24■□□□□ 0.03
IRX4P78413 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
IRX4P78413 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC15.24■□□□□ 0.03
IRX4P78413 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
IRX4P78413 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
IRX4P78413 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
IRX4P78413 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC15.24■□□□□ 0.03
IRX4P78413 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.24■□□□□ 0.03
IRX4P78413 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
IRX4P78413 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.23■□□□□ 0.03
IRX4P78413 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms