Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 FAM58BP-201ENST00000439056 645 ntBASIC12.71□□□□□ -0.37
HIST1H3AP68431 CSF2RBP1-201ENST00000447905 391 ntBASIC12.71□□□□□ -0.37
HIST1H3AP68431 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC12.71□□□□□ -0.37
HIST1H3AP68431 ACA64.2-201ENST00000459014 129 ntBASIC12.71□□□□□ -0.37
HIST1H3AP68431 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC12.71□□□□□ -0.37
HIST1H3AP68431 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC12.71□□□□□ -0.37
HIST1H3AP68431 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC12.71□□□□□ -0.37
HIST1H3AP68431 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC12.71□□□□□ -0.37
HIST1H3AP68431 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
HIST1H3AP68431 MIR6775-201ENST00000617557 69 ntBASIC12.71□□□□□ -0.37
HIST1H3AP68431 Z98259.2-201ENST00000641583 609 ntBASIC12.71□□□□□ -0.37
HIST1H3AP68431 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
HIST1H3AP68431 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC12.71□□□□□ -0.37
HIST1H3AP68431 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
HIST1H3AP68431 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
HIST1H3AP68431 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
HIST1H3AP68431 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.38
HIST1H3AP68431 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.38
HIST1H3AP68431 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
HIST1H3AP68431 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
HIST1H3AP68431 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
HIST1H3AP68431 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
HIST1H3AP68431 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC12.71□□□□□ -0.38
HIST1H3AP68431 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
HIST1H3AP68431 FAS-202ENST00000352159 1722 ntTSL 5 BASIC12.71□□□□□ -0.38
HIST1H3AP68431 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC12.71□□□□□ -0.38
HIST1H3AP68431 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
HIST1H3AP68431 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HIST1H3AP68431 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
HIST1H3AP68431 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
HIST1H3AP68431 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HIST1H3AP68431 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HIST1H3AP68431 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HIST1H3AP68431 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HIST1H3AP68431 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HIST1H3AP68431 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HIST1H3AP68431 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
HIST1H3AP68431 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HIST1H3AP68431 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HIST1H3AP68431 AC063926.2-201ENST00000623766 1308 ntBASIC12.7□□□□□ -0.38
HIST1H3AP68431 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
HIST1H3AP68431 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC12.7□□□□□ -0.38
HIST1H3AP68431 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC12.7□□□□□ -0.38
HIST1H3AP68431 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HIST1H3AP68431 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC12.7□□□□□ -0.38
HIST1H3AP68431 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC12.7□□□□□ -0.38
HIST1H3AP68431 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HIST1H3AP68431 AL354877.1-201ENST00000424412 413 ntBASIC12.7□□□□□ -0.38
HIST1H3AP68431 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC12.7□□□□□ -0.38
HIST1H3AP68431 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC12.7□□□□□ -0.38
HIST1H3AP68431 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC12.7□□□□□ -0.38
HIST1H3AP68431 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC12.7□□□□□ -0.38
HIST1H3AP68431 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC12.7□□□□□ -0.38
HIST1H3AP68431 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC12.7□□□□□ -0.38
HIST1H3AP68431 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HIST1H3AP68431 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC12.7□□□□□ -0.38
HIST1H3AP68431 AL162426.1-201ENST00000624141 743 ntBASIC12.7□□□□□ -0.38
HIST1H3AP68431 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
HIST1H3AP68431 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
HIST1H3AP68431 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HIST1H3AP68431 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
HIST1H3AP68431 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
HIST1H3AP68431 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HIST1H3AP68431 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC12.7□□□□□ -0.38
HIST1H3AP68431 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC12.7□□□□□ -0.38
HIST1H3AP68431 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HIST1H3AP68431 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
HIST1H3AP68431 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HIST1H3AP68431 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC12.7□□□□□ -0.38
HIST1H3AP68431 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
HIST1H3AP68431 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
HIST1H3AP68431 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HIST1H3AP68431 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HIST1H3AP68431 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
HIST1H3AP68431 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
HIST1H3AP68431 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HIST1H3AP68431 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC12.7□□□□□ -0.38
HIST1H3AP68431 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC12.7□□□□□ -0.38
HIST1H3AP68431 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HIST1H3AP68431 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
HIST1H3AP68431 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HIST1H3AP68431 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
HIST1H3AP68431 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HIST1H3AP68431 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HIST1H3AP68431 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
HIST1H3AP68431 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
HIST1H3AP68431 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
HIST1H3AP68431 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
HIST1H3AP68431 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
HIST1H3AP68431 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
HIST1H3AP68431 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC12.69□□□□□ -0.38
HIST1H3AP68431 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
HIST1H3AP68431 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
HIST1H3AP68431 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HIST1H3AP68431 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
HIST1H3AP68431 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HIST1H3AP68431 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC12.69□□□□□ -0.38
HIST1H3AP68431 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
HIST1H3AP68431 USP17L6P-201ENST00000382470 1197 ntBASIC12.69□□□□□ -0.38
HIST1H3AP68431 AC099336.1-201ENST00000417053 1171 ntBASIC12.69□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms