Protein–RNA interactions for Protein: P56750

CLDN17, Claudin-17, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN17P56750 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLDN17P56750 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC13.01□□□□□ -0.33
CLDN17P56750 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC13.01□□□□□ -0.33
CLDN17P56750 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC13.01□□□□□ -0.33
CLDN17P56750 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
CLDN17P56750 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.01□□□□□ -0.33
CLDN17P56750 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
CLDN17P56750 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLDN17P56750 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC13.01□□□□□ -0.33
CLDN17P56750 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLDN17P56750 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.01□□□□□ -0.33
CLDN17P56750 HSPA7-201ENST00000445535 1927 ntBASIC13.01□□□□□ -0.33
CLDN17P56750 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLDN17P56750 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLDN17P56750 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CLDN17P56750 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
CLDN17P56750 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CLDN17P56750 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.01□□□□□ -0.33
CLDN17P56750 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CLDN17P56750 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLDN17P56750 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CLDN17P56750 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLDN17P56750 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLDN17P56750 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLDN17P56750 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
CLDN17P56750 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
CLDN17P56750 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CLDN17P56750 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC13□□□□□ -0.33
CLDN17P56750 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLDN17P56750 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CLDN17P56750 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
CLDN17P56750 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CLDN17P56750 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLDN17P56750 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
CLDN17P56750 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
CLDN17P56750 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CLDN17P56750 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13□□□□□ -0.33
CLDN17P56750 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC13□□□□□ -0.33
CLDN17P56750 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CLDN17P56750 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
CLDN17P56750 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC13□□□□□ -0.33
CLDN17P56750 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC13□□□□□ -0.33
CLDN17P56750 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13□□□□□ -0.33
CLDN17P56750 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLDN17P56750 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLDN17P56750 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC13□□□□□ -0.33
CLDN17P56750 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC13□□□□□ -0.33
CLDN17P56750 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC13□□□□□ -0.33
CLDN17P56750 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13□□□□□ -0.33
CLDN17P56750 BTBD6P1-201ENST00000412176 1267 ntBASIC13□□□□□ -0.33
CLDN17P56750 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC13□□□□□ -0.33
CLDN17P56750 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC13□□□□□ -0.33
CLDN17P56750 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC13□□□□□ -0.33
CLDN17P56750 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC13□□□□□ -0.33
CLDN17P56750 RPSAP36-202ENST00000494591 1261 ntBASIC13□□□□□ -0.33
CLDN17P56750 HNRNPA1P36-201ENST00000521313 955 ntBASIC13□□□□□ -0.33
CLDN17P56750 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC13□□□□□ -0.33
CLDN17P56750 CFL1-212ENST00000531413 636 ntTSL 3 BASIC13□□□□□ -0.33
CLDN17P56750 RIT1-205ENST00000539040 919 ntTSL 2 BASIC13□□□□□ -0.33
CLDN17P56750 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC13□□□□□ -0.33
CLDN17P56750 AL583810.1-201ENST00000553344 1045 ntBASIC13□□□□□ -0.33
CLDN17P56750 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
CLDN17P56750 AC005586.2-201ENST00000563946 837 ntBASIC13□□□□□ -0.33
CLDN17P56750 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13□□□□□ -0.33
CLDN17P56750 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC13□□□□□ -0.33
CLDN17P56750 MIR4783-201ENST00000580343 82 ntBASIC13□□□□□ -0.33
CLDN17P56750 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC13□□□□□ -0.33
CLDN17P56750 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
CLDN17P56750 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
CLDN17P56750 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
CLDN17P56750 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLDN17P56750 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
CLDN17P56750 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
CLDN17P56750 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CLDN17P56750 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CLDN17P56750 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
CLDN17P56750 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
CLDN17P56750 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLDN17P56750 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC13□□□□□ -0.33
CLDN17P56750 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLDN17P56750 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLDN17P56750 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLDN17P56750 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13□□□□□ -0.33
CLDN17P56750 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
CLDN17P56750 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
CLDN17P56750 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
CLDN17P56750 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC13□□□□□ -0.33
CLDN17P56750 AMT-239ENST00000636865 1914 ntTSL 5 BASIC13□□□□□ -0.33
CLDN17P56750 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
CLDN17P56750 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
CLDN17P56750 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLDN17P56750 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLDN17P56750 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLDN17P56750 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
CLDN17P56750 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLDN17P56750 FAS-202ENST00000352159 1722 ntTSL 5 BASIC12.99□□□□□ -0.33
CLDN17P56750 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC12.99□□□□□ -0.33
CLDN17P56750 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLDN17P56750 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
CLDN17P56750 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms