Protein–RNA interactions for Protein: P56539

CAV3, Caveolin-3, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAV3P56539 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CAV3P56539 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CAV3P56539 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CAV3P56539 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC13.06□□□□□ -0.32
CAV3P56539 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CAV3P56539 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC13.06□□□□□ -0.32
CAV3P56539 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
CAV3P56539 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
CAV3P56539 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CAV3P56539 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CAV3P56539 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CAV3P56539 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CAV3P56539 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC13.05□□□□□ -0.32
CAV3P56539 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC13.05□□□□□ -0.32
CAV3P56539 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
CAV3P56539 MEP1AP4-201ENST00000423244 1087 ntBASIC13.05□□□□□ -0.32
CAV3P56539 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC13.05□□□□□ -0.32
CAV3P56539 TSPY16P-201ENST00000449843 468 ntBASIC13.05□□□□□ -0.32
CAV3P56539 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC13.05□□□□□ -0.32
CAV3P56539 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC13.05□□□□□ -0.32
CAV3P56539 MEIS3P1-201ENST00000495167 958 ntBASIC13.05□□□□□ -0.32
CAV3P56539 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC13.05□□□□□ -0.32
CAV3P56539 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.05□□□□□ -0.32
CAV3P56539 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CAV3P56539 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC13.05□□□□□ -0.32
CAV3P56539 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CAV3P56539 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.05□□□□□ -0.32
CAV3P56539 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC13.05□□□□□ -0.32
CAV3P56539 SRD5A3P1-201ENST00000603021 949 ntBASIC13.05□□□□□ -0.32
CAV3P56539 RNA5-8SN1-201ENST00000610460 153 ntBASIC13.05□□□□□ -0.32
CAV3P56539 RNA5-8SN5-202ENST00000612463 153 ntBASIC13.05□□□□□ -0.32
CAV3P56539 RNA5-8SN4-201ENST00000613359 153 ntBASIC13.05□□□□□ -0.32
CAV3P56539 RNA5-8SN5-201ENST00000619471 153 ntBASIC13.05□□□□□ -0.32
CAV3P56539 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13.05□□□□□ -0.32
CAV3P56539 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC13.05□□□□□ -0.32
CAV3P56539 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC13.05□□□□□ -0.32
CAV3P56539 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CAV3P56539 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC13.05□□□□□ -0.32
CAV3P56539 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.05□□□□□ -0.32
CAV3P56539 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CAV3P56539 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CAV3P56539 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CAV3P56539 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC13.05□□□□□ -0.32
CAV3P56539 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CAV3P56539 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CAV3P56539 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC13.05□□□□□ -0.32
CAV3P56539 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CAV3P56539 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CAV3P56539 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
CAV3P56539 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CAV3P56539 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
CAV3P56539 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
CAV3P56539 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CAV3P56539 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CAV3P56539 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
CAV3P56539 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CAV3P56539 CLK3P2-201ENST00000427566 1453 ntBASIC13.04□□□□□ -0.32
CAV3P56539 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
CAV3P56539 AC215219.1-201ENST00000400706 1817 ntBASIC13.04□□□□□ -0.32
CAV3P56539 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
CAV3P56539 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CAV3P56539 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
CAV3P56539 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CAV3P56539 AC011840.2-201ENST00000563063 1520 ntBASIC13.04□□□□□ -0.32
CAV3P56539 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CAV3P56539 PCDHA6-201ENST00000378126 3267 ntBASIC13.04□□□□□ -0.32
CAV3P56539 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CAV3P56539 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC13.04□□□□□ -0.32
CAV3P56539 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
CAV3P56539 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CAV3P56539 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CAV3P56539 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CAV3P56539 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
CAV3P56539 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CAV3P56539 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CAV3P56539 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC13.04□□□□□ -0.32
CAV3P56539 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC13.04□□□□□ -0.32
CAV3P56539 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CAV3P56539 PKIG-203ENST00000372887 769 ntTSL 3 BASIC13.04□□□□□ -0.32
CAV3P56539 HMGN1P19-201ENST00000436976 333 ntBASIC13.04□□□□□ -0.32
CAV3P56539 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.04□□□□□ -0.32
CAV3P56539 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC13.04□□□□□ -0.32
CAV3P56539 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CAV3P56539 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CAV3P56539 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC13.04□□□□□ -0.32
CAV3P56539 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
CAV3P56539 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC13.04□□□□□ -0.32
CAV3P56539 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC13.04□□□□□ -0.32
CAV3P56539 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
CAV3P56539 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.04□□□□□ -0.32
CAV3P56539 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC13.04□□□□□ -0.32
CAV3P56539 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
CAV3P56539 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
CAV3P56539 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC13.04□□□□□ -0.32
CAV3P56539 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CAV3P56539 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
CAV3P56539 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CAV3P56539 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CAV3P56539 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC13.04□□□□□ -0.32
CAV3P56539 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms