Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
RNF144AP50876 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF144AP50876 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF144AP50876 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
RNF144AP50876 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF144AP50876 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF144AP50876 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF144AP50876 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF144AP50876 LBX2-201ENST00000341396 886 ntTSL 3 BASIC13.62□□□□□ -0.23
RNF144AP50876 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RNF144AP50876 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF144AP50876 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC13.62□□□□□ -0.23
RNF144AP50876 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF144AP50876 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF144AP50876 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC13.62□□□□□ -0.23
RNF144AP50876 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF144AP50876 RN7SKP175-201ENST00000408472 289 ntBASIC13.62□□□□□ -0.23
RNF144AP50876 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
RNF144AP50876 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
RNF144AP50876 TPT1P11-201ENST00000458482 498 ntBASIC13.62□□□□□ -0.23
RNF144AP50876 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
RNF144AP50876 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF144AP50876 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC13.62□□□□□ -0.23
RNF144AP50876 COX5BP1-201ENST00000507622 393 ntBASIC13.62□□□□□ -0.23
RNF144AP50876 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC13.62□□□□□ -0.23
RNF144AP50876 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC13.62□□□□□ -0.23
RNF144AP50876 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC13.62□□□□□ -0.23
RNF144AP50876 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC13.62□□□□□ -0.23
RNF144AP50876 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC13.62□□□□□ -0.23
RNF144AP50876 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
RNF144AP50876 AP006547.1-201ENST00000563435 692 ntBASIC13.62□□□□□ -0.23
RNF144AP50876 HNRNPA1P48-202ENST00000565308 961 ntBASIC13.62□□□□□ -0.23
RNF144AP50876 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC13.62□□□□□ -0.23
RNF144AP50876 AC073413.1-201ENST00000603927 732 ntBASIC13.62□□□□□ -0.23
RNF144AP50876 AL512343.1-201ENST00000605837 169 ntBASIC13.62□□□□□ -0.23
RNF144AP50876 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF144AP50876 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF144AP50876 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC13.62□□□□□ -0.23
RNF144AP50876 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF144AP50876 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF144AP50876 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF144AP50876 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
RNF144AP50876 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
RNF144AP50876 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC13.62□□□□□ -0.23
RNF144AP50876 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF144AP50876 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF144AP50876 AC215219.1-201ENST00000400706 1817 ntBASIC13.62□□□□□ -0.23
RNF144AP50876 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC13.62□□□□□ -0.23
RNF144AP50876 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.62□□□□□ -0.23
RNF144AP50876 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.62□□□□□ -0.23
RNF144AP50876 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF144AP50876 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
RNF144AP50876 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RNF144AP50876 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RNF144AP50876 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
RNF144AP50876 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.61□□□□□ -0.23
RNF144AP50876 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RNF144AP50876 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RNF144AP50876 AL137784.3-201ENST00000623858 2288 ntBASIC13.61□□□□□ -0.23
RNF144AP50876 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RNF144AP50876 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RNF144AP50876 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC13.61□□□□□ -0.23
RNF144AP50876 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RNF144AP50876 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
RNF144AP50876 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RNF144AP50876 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.61□□□□□ -0.23
RNF144AP50876 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RNF144AP50876 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RNF144AP50876 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC13.61□□□□□ -0.23
RNF144AP50876 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
RNF144AP50876 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RNF144AP50876 TLE1P1-201ENST00000422965 589 ntBASIC13.61□□□□□ -0.23
RNF144AP50876 AC026954.1-201ENST00000429771 1293 ntBASIC13.61□□□□□ -0.23
RNF144AP50876 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RNF144AP50876 KRT43P-201ENST00000434019 910 ntBASIC13.61□□□□□ -0.23
RNF144AP50876 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC13.61□□□□□ -0.23
RNF144AP50876 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
RNF144AP50876 U91328.1-201ENST00000437528 223 ntBASIC13.61□□□□□ -0.23
RNF144AP50876 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC13.61□□□□□ -0.23
RNF144AP50876 GAPDHP21-201ENST00000450301 1010 ntBASIC13.61□□□□□ -0.23
RNF144AP50876 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC13.61□□□□□ -0.23
RNF144AP50876 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RNF144AP50876 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC13.61□□□□□ -0.23
RNF144AP50876 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RNF144AP50876 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC13.61□□□□□ -0.23
RNF144AP50876 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
RNF144AP50876 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC13.61□□□□□ -0.23
RNF144AP50876 AC121493.1-201ENST00000602316 450 ntBASIC13.61□□□□□ -0.23
RNF144AP50876 RPS24-214ENST00000613865 538 ntTSL 5 BASIC13.61□□□□□ -0.23
RNF144AP50876 LARP4-220ENST00000615080 856 ntTSL 5 BASIC13.61□□□□□ -0.23
RNF144AP50876 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
RNF144AP50876 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
RNF144AP50876 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC13.61□□□□□ -0.23
RNF144AP50876 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RNF144AP50876 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
RNF144AP50876 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.61□□□□□ -0.23
RNF144AP50876 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC13.61□□□□□ -0.23
RNF144AP50876 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RNF144AP50876 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
RNF144AP50876 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms