Protein–RNA interactions for Protein: P49674

CSNK1E, Casein kinase I isoform epsilon, humanhuman

Known RBP Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1EP49674 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.15□□□□□ -0.14
CSNK1EP49674 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
CSNK1EP49674 AC104640.1-201ENST00000562617 2109 ntBASIC14.15□□□□□ -0.14
CSNK1EP49674 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CSNK1EP49674 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CSNK1EP49674 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.15□□□□□ -0.14
CSNK1EP49674 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CSNK1EP49674 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CSNK1EP49674 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC14.15□□□□□ -0.14
CSNK1EP49674 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CSNK1EP49674 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
CSNK1EP49674 LINC00528-201ENST00000600723 2160 ntBASIC14.15□□□□□ -0.15
CSNK1EP49674 AGGF1P1-201ENST00000509500 2073 ntBASIC14.14□□□□□ -0.15
CSNK1EP49674 AGAP7P-201ENST00000582299 2062 ntBASIC14.14□□□□□ -0.15
CSNK1EP49674 AGAP14-201ENST00000624701 2060 ntBASIC14.14□□□□□ -0.15
CSNK1EP49674 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSNK1EP49674 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CSNK1EP49674 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSNK1EP49674 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSNK1EP49674 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14.14□□□□□ -0.15
CSNK1EP49674 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CSNK1EP49674 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSNK1EP49674 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSNK1EP49674 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSNK1EP49674 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSNK1EP49674 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSNK1EP49674 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSNK1EP49674 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CSNK1EP49674 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSNK1EP49674 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.14□□□□□ -0.15
CSNK1EP49674 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.14□□□□□ -0.15
CSNK1EP49674 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CSNK1EP49674 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.14□□□□□ -0.15
CSNK1EP49674 AL161772.1-201ENST00000610494 4412 ntBASIC14.14□□□□□ -0.15
CSNK1EP49674 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
CSNK1EP49674 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CSNK1EP49674 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC14.14□□□□□ -0.15
CSNK1EP49674 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSNK1EP49674 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSNK1EP49674 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC14.14□□□□□ -0.15
CSNK1EP49674 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CSNK1EP49674 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSNK1EP49674 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
CSNK1EP49674 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC14.14□□□□□ -0.15
CSNK1EP49674 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC14.14□□□□□ -0.15
CSNK1EP49674 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC14.14□□□□□ -0.15
CSNK1EP49674 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CSNK1EP49674 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC14.14□□□□□ -0.15
CSNK1EP49674 RN7SL665P-201ENST00000578793 300 ntBASIC14.14□□□□□ -0.15
CSNK1EP49674 SIGLEC22P-201ENST00000599104 714 ntBASIC14.14□□□□□ -0.15
CSNK1EP49674 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC14.14□□□□□ -0.15
CSNK1EP49674 AC007250.1-201ENST00000608934 338 ntBASIC14.14□□□□□ -0.15
CSNK1EP49674 AC006158.1-201ENST00000610661 249 ntBASIC14.14□□□□□ -0.15
CSNK1EP49674 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CSNK1EP49674 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CSNK1EP49674 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CSNK1EP49674 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CSNK1EP49674 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSNK1EP49674 AC018529.2-202ENST00000611482 3087 ntBASIC14.14□□□□□ -0.15
CSNK1EP49674 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC14.14□□□□□ -0.15
CSNK1EP49674 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSNK1EP49674 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSNK1EP49674 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSNK1EP49674 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.14□□□□□ -0.15
CSNK1EP49674 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.14□□□□□ -0.15
CSNK1EP49674 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSNK1EP49674 AL591122.2-201ENST00000624125 1853 ntBASIC14.14□□□□□ -0.15
CSNK1EP49674 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSNK1EP49674 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.14□□□□□ -0.15
CSNK1EP49674 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSNK1EP49674 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC14.14□□□□□ -0.15
CSNK1EP49674 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC14.14□□□□□ -0.15
CSNK1EP49674 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSNK1EP49674 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSNK1EP49674 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.14□□□□□ -0.15
CSNK1EP49674 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC14.14□□□□□ -0.15
CSNK1EP49674 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CSNK1EP49674 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC14.14□□□□□ -0.15
CSNK1EP49674 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSNK1EP49674 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.13□□□□□ -0.15
CSNK1EP49674 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CSNK1EP49674 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CSNK1EP49674 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CSNK1EP49674 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CSNK1EP49674 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CSNK1EP49674 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CSNK1EP49674 LAP3P2-201ENST00000454686 1454 ntBASIC14.13□□□□□ -0.15
CSNK1EP49674 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CSNK1EP49674 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CSNK1EP49674 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CSNK1EP49674 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CSNK1EP49674 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC14.13□□□□□ -0.15
CSNK1EP49674 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CSNK1EP49674 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CSNK1EP49674 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CSNK1EP49674 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CSNK1EP49674 SAT1-201ENST00000379251 801 ntTSL 2 BASIC14.13□□□□□ -0.15
CSNK1EP49674 SAT1-202ENST00000379253 909 ntTSL 2 BASIC14.13□□□□□ -0.15
CSNK1EP49674 SAT1-203ENST00000379254 868 ntTSL 3 BASIC14.13□□□□□ -0.15
CSNK1EP49674 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms