Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
UBE2AP49459 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
UBE2AP49459 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
UBE2AP49459 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC9.32□□□□□ -0.92
UBE2AP49459 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC9.32□□□□□ -0.92
UBE2AP49459 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC9.32□□□□□ -0.92
UBE2AP49459 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC9.32□□□□□ -0.92
UBE2AP49459 EDRF1-201ENST00000337623 4387 ntAPPRIS P3 TSL 5 BASIC9.32□□□□□ -0.92
UBE2AP49459 SLIT2-201ENST00000273739 5132 ntTSL 5 BASIC9.32□□□□□ -0.92
UBE2AP49459 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
UBE2AP49459 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
UBE2AP49459 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
UBE2AP49459 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC9.32□□□□□ -0.92
UBE2AP49459 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
UBE2AP49459 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC9.32□□□□□ -0.92
UBE2AP49459 TTYH3-204ENST00000407643 4537 ntTSL 5 BASIC9.32□□□□□ -0.92
UBE2AP49459 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
UBE2AP49459 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC9.31□□□□□ -0.92
UBE2AP49459 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC9.31□□□□□ -0.92
UBE2AP49459 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC9.31□□□□□ -0.92
UBE2AP49459 PCNX2-203ENST00000344698 5348 ntAPPRIS ALT2 TSL 2 BASIC9.31□□□□□ -0.92
UBE2AP49459 SLC4A2-204ENST00000461735 4387 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
UBE2AP49459 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
UBE2AP49459 PCDHGB1-201ENST00000523390 4590 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
UBE2AP49459 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
UBE2AP49459 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
UBE2AP49459 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC9.31□□□□□ -0.92
UBE2AP49459 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC9.31□□□□□ -0.92
UBE2AP49459 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
UBE2AP49459 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
UBE2AP49459 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
UBE2AP49459 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
UBE2AP49459 PML-210ENST00000563500 4502 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
UBE2AP49459 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
UBE2AP49459 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
UBE2AP49459 DPY19L1-201ENST00000310974 4870 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
UBE2AP49459 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC9.31□□□□□ -0.92
UBE2AP49459 ZNF106-205ENST00000565611 5081 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
UBE2AP49459 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC9.31□□□□□ -0.92
UBE2AP49459 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
UBE2AP49459 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
UBE2AP49459 RNU1-114P-201ENST00000365297 166 ntBASIC9.31□□□□□ -0.92
UBE2AP49459 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC9.31□□□□□ -0.92
UBE2AP49459 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
UBE2AP49459 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
UBE2AP49459 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC9.31□□□□□ -0.92
UBE2AP49459 HLA-K-203ENST00000430151 1046 ntBASIC9.31□□□□□ -0.92
UBE2AP49459 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC9.31□□□□□ -0.92
UBE2AP49459 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
UBE2AP49459 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC9.31□□□□□ -0.92
UBE2AP49459 AC022447.6-201ENST00000515522 438 ntBASIC9.31□□□□□ -0.92
UBE2AP49459 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
UBE2AP49459 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC9.31□□□□□ -0.92
UBE2AP49459 CDK4-206ENST00000549606 558 ntTSL 2 BASIC9.31□□□□□ -0.92
UBE2AP49459 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC9.31□□□□□ -0.92
UBE2AP49459 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC9.31□□□□□ -0.92
UBE2AP49459 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
UBE2AP49459 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC9.31□□□□□ -0.92
UBE2AP49459 AP005019.2-201ENST00000615104 511 ntBASIC9.31□□□□□ -0.92
UBE2AP49459 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC9.31□□□□□ -0.92
UBE2AP49459 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC9.31□□□□□ -0.92
UBE2AP49459 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
UBE2AP49459 HFE2-206ENST00000634927 506 ntTSL 4 BASIC9.31□□□□□ -0.92
UBE2AP49459 KIAA1549-202ENST00000440172 12379 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
UBE2AP49459 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
UBE2AP49459 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC9.31□□□□□ -0.92
UBE2AP49459 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC9.31□□□□□ -0.92
UBE2AP49459 CRTAP-201ENST00000320954 6630 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
UBE2AP49459 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
UBE2AP49459 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
UBE2AP49459 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
UBE2AP49459 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC9.31□□□□□ -0.92
UBE2AP49459 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC9.31□□□□□ -0.92
UBE2AP49459 NEK1-201ENST00000439128 5653 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
UBE2AP49459 COL8A1-201ENST00000261037 5705 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
UBE2AP49459 DCLK3-203ENST00000636136 5446 ntTSL 5 BASIC9.31□□□□□ -0.92
UBE2AP49459 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC9.31□□□□□ -0.92
UBE2AP49459 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC9.31□□□□□ -0.92
UBE2AP49459 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
UBE2AP49459 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC9.31□□□□□ -0.92
UBE2AP49459 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
UBE2AP49459 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
UBE2AP49459 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC9.31□□□□□ -0.92
UBE2AP49459 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
UBE2AP49459 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC9.31□□□□□ -0.92
UBE2AP49459 AMT-232ENST00000636199 1546 ntTSL 5 BASIC9.31□□□□□ -0.92
UBE2AP49459 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
UBE2AP49459 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
UBE2AP49459 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
UBE2AP49459 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC9.3□□□□□ -0.92
UBE2AP49459 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
UBE2AP49459 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
UBE2AP49459 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
UBE2AP49459 HERC2P3-204ENST00000426501 5995 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
UBE2AP49459 AC005840.4-201ENST00000541242 2494 ntBASIC9.3□□□□□ -0.92
UBE2AP49459 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
UBE2AP49459 API5-203ENST00000455725 2257 ntTSL 2 BASIC9.3□□□□□ -0.92
UBE2AP49459 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
UBE2AP49459 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
UBE2AP49459 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC9.3□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms