Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 RPL10L-201ENST00000298283 812 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
HTTP42858 CSRP2-201ENST00000311083 943 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HTTP42858 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
HTTP42858 AC092810.2-201ENST00000431570 362 ntBASIC15.7■□□□□ 0.1
HTTP42858 CSRP2-203ENST00000547435 632 ntTSL 2 BASIC15.7■□□□□ 0.1
HTTP42858 AL031710.1-201ENST00000570022 468 ntTSL 2 BASIC15.7■□□□□ 0.1
HTTP42858 NAT9-204ENST00000578822 839 ntTSL 3 BASIC15.7■□□□□ 0.1
HTTP42858 AC015922.3-201ENST00000582780 347 ntTSL 3 BASIC15.7■□□□□ 0.1
HTTP42858 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HTTP42858 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HTTP42858 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HTTP42858 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.7■□□□□ 0.1
HTTP42858 NR2C2AP-201ENST00000331552 1293 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HTTP42858 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HTTP42858 CYCS-203ENST00000409764 799 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
HTTP42858 NR2C2AP-202ENST00000420605 859 ntTSL 2 BASIC15.7■□□□□ 0.1
HTTP42858 AC079325.1-201ENST00000430386 857 ntBASIC15.7■□□□□ 0.1
HTTP42858 C3orf84-201ENST00000432035 669 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
HTTP42858 AL359182.1-201ENST00000435915 469 ntTSL 3 BASIC15.7■□□□□ 0.1
HTTP42858 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC15.7■□□□□ 0.1
HTTP42858 AC022784.6-202ENST00000523246 674 ntTSL 5 BASIC15.7■□□□□ 0.1
HTTP42858 AP000439.2-201ENST00000542064 726 ntTSL 2 BASIC15.7■□□□□ 0.1
HTTP42858 AL512356.1-201ENST00000548203 535 ntTSL 3 BASIC15.7■□□□□ 0.1
HTTP42858 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HTTP42858 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HTTP42858 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
HTTP42858 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HTTP42858 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
HTTP42858 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HTTP42858 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
HTTP42858 TEX38-201ENST00000334122 866 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HTTP42858 AC007881.1-201ENST00000437460 187 ntBASIC15.69■□□□□ 0.1
HTTP42858 TRBV11-2-201ENST00000471935 408 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HTTP42858 SMAD1-AS1-201ENST00000513542 481 ntTSL 2 BASIC15.69■□□□□ 0.1
HTTP42858 AP003043.1-201ENST00000527804 547 ntTSL 4 BASIC15.69■□□□□ 0.1
HTTP42858 PLA2G4C-AS1-203ENST00000601950 454 ntTSL 3 BASIC15.69■□□□□ 0.1
HTTP42858 GOSR2-209ENST00000575949 1444 ntTSL 2 BASIC15.69■□□□□ 0.1
HTTP42858 SALL4P6-201ENST00000429385 1691 ntBASIC15.69■□□□□ 0.1
HTTP42858 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.69■□□□□ 0.1
HTTP42858 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HTTP42858 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HTTP42858 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.69■□□□□ 0.1
HTTP42858 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
HTTP42858 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HTTP42858 BLVRA-201ENST00000265523 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HTTP42858 AC091729.3-203ENST00000413706 674 ntTSL 5 BASIC15.69■□□□□ 0.1
HTTP42858 AC132825.4-202ENST00000578792 434 ntBASIC15.69■□□□□ 0.1
HTTP42858 AC026120.2-201ENST00000617239 309 ntBASIC15.69■□□□□ 0.1
HTTP42858 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
HTTP42858 AL513477.1-201ENST00000602865 2407 ntBASIC15.69■□□□□ 0.1
HTTP42858 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HTTP42858 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HTTP42858 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
HTTP42858 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
HTTP42858 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.69■□□□□ 0.1
HTTP42858 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC15.68■□□□□ 0.1
HTTP42858 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HTTP42858 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.68■□□□□ 0.1
HTTP42858 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
HTTP42858 RRNAD1-204ENST00000476229 1096 ntTSL 5 BASIC15.68■□□□□ 0.1
HTTP42858 IQSEC2-205ENST00000498281 673 ntTSL 3 BASIC15.68■□□□□ 0.1
HTTP42858 RPSAP70-201ENST00000504462 864 ntBASIC15.68■□□□□ 0.1
HTTP42858 AC048380.1-201ENST00000589818 465 ntTSL 3 BASIC15.68■□□□□ 0.1
HTTP42858 AC079331.1-201ENST00000623200 1200 ntBASIC15.68■□□□□ 0.1
HTTP42858 AC026691.1-201ENST00000602502 2017 ntBASIC15.68■□□□□ 0.1
HTTP42858 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
HTTP42858 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
HTTP42858 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC15.68■□□□□ 0.1
HTTP42858 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HTTP42858 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
HTTP42858 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HTTP42858 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HTTP42858 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HTTP42858 MBIP-211ENST00000621657 1809 ntTSL 5 BASIC15.68■□□□□ 0.1
HTTP42858 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.68■□□□□ 0.1
HTTP42858 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HTTP42858 HSD3BP1-201ENST00000286193 1111 ntBASIC15.68■□□□□ 0.1
HTTP42858 NAT8B-201ENST00000377712 765 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
HTTP42858 FUNDC1-201ENST00000378045 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HTTP42858 AC138150.1-201ENST00000589950 570 ntTSL 4 BASIC15.68■□□□□ 0.1
HTTP42858 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
HTTP42858 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
HTTP42858 MYADML-201ENST00000474610 2147 ntBASIC15.68■□□□□ 0.1
HTTP42858 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HTTP42858 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HTTP42858 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
HTTP42858 LINC02449-201ENST00000304751 795 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HTTP42858 WFDC2-203ENST00000342873 818 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HTTP42858 TCEAL5-201ENST00000372680 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HTTP42858 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HTTP42858 RPL18AP15-201ENST00000430258 517 ntBASIC15.68■□□□□ 0.1
HTTP42858 AC005722.1-201ENST00000431878 964 ntBASIC15.68■□□□□ 0.1
HTTP42858 ABCC6P2-201ENST00000526069 590 ntBASIC15.68■□□□□ 0.1
HTTP42858 AC023051.2-201ENST00000541141 460 ntBASIC15.68■□□□□ 0.1
HTTP42858 DMC1-207ENST00000616615 1595 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HTTP42858 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HTTP42858 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC15.67■□□□□ 0.1
HTTP42858 PES1P2-201ENST00000449745 1735 ntBASIC15.67■□□□□ 0.1
HTTP42858 AL031590.1-202ENST00000641466 1737 ntBASIC15.67■□□□□ 0.1
HTTP42858 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms