Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC14.61□□□□□ -0.07
MDH1P40925 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MDH1P40925 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
MDH1P40925 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
MDH1P40925 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MDH1P40925 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MDH1P40925 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC14.61□□□□□ -0.07
MDH1P40925 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MDH1P40925 USP17L6P-201ENST00000382470 1197 ntBASIC14.61□□□□□ -0.07
MDH1P40925 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC14.61□□□□□ -0.07
MDH1P40925 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
MDH1P40925 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.61□□□□□ -0.07
MDH1P40925 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
MDH1P40925 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.61□□□□□ -0.07
MDH1P40925 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC14.61□□□□□ -0.07
MDH1P40925 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC14.61□□□□□ -0.07
MDH1P40925 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
MDH1P40925 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC14.61□□□□□ -0.07
MDH1P40925 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC14.61□□□□□ -0.07
MDH1P40925 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC14.61□□□□□ -0.07
MDH1P40925 AL589739.1-201ENST00000607720 493 ntBASIC14.61□□□□□ -0.07
MDH1P40925 AP001002.3-201ENST00000623482 206 ntBASIC14.61□□□□□ -0.07
MDH1P40925 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
MDH1P40925 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
MDH1P40925 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC14.61□□□□□ -0.07
MDH1P40925 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
MDH1P40925 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.61□□□□□ -0.07
MDH1P40925 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC14.61□□□□□ -0.07
MDH1P40925 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.61□□□□□ -0.07
MDH1P40925 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
MDH1P40925 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MDH1P40925 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC14.61□□□□□ -0.07
MDH1P40925 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
MDH1P40925 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC14.61□□□□□ -0.07
MDH1P40925 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
MDH1P40925 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
MDH1P40925 AC012531.1-201ENST00000562848 2680 ntBASIC14.6□□□□□ -0.07
MDH1P40925 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
MDH1P40925 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
MDH1P40925 CELF2-216ENST00000637215 2724 ntTSL 5 BASIC14.6□□□□□ -0.07
MDH1P40925 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC14.6□□□□□ -0.07
MDH1P40925 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
MDH1P40925 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
MDH1P40925 TUBGCP5-208ENST00000620435 3342 ntTSL 2 BASIC14.6□□□□□ -0.07
MDH1P40925 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
MDH1P40925 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
MDH1P40925 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
MDH1P40925 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.6□□□□□ -0.07
MDH1P40925 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.6□□□□□ -0.07
MDH1P40925 LBH-204ENST00000406087 559 ntTSL 4 BASIC14.6□□□□□ -0.07
MDH1P40925 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.6□□□□□ -0.07
MDH1P40925 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.6□□□□□ -0.07
MDH1P40925 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC14.6□□□□□ -0.07
MDH1P40925 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC14.6□□□□□ -0.07
MDH1P40925 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.6□□□□□ -0.07
MDH1P40925 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
MDH1P40925 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC14.6□□□□□ -0.07
MDH1P40925 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC14.6□□□□□ -0.07
MDH1P40925 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.6□□□□□ -0.07
MDH1P40925 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC14.6□□□□□ -0.07
MDH1P40925 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.6□□□□□ -0.07
MDH1P40925 PRSS30P-206ENST00000641773 873 ntBASIC14.6□□□□□ -0.07
MDH1P40925 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
MDH1P40925 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC14.6□□□□□ -0.07
MDH1P40925 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC14.6□□□□□ -0.07
MDH1P40925 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
MDH1P40925 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
MDH1P40925 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
MDH1P40925 MAD1L1-201ENST00000265854 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
MDH1P40925 ZBED2-201ENST00000317012 2311 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
MDH1P40925 MIR193BHG-211ENST00000641433 5365 ntBASIC14.6□□□□□ -0.07
MDH1P40925 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
MDH1P40925 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
MDH1P40925 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
MDH1P40925 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
MDH1P40925 LEPROTL1-201ENST00000321250 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
MDH1P40925 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
MDH1P40925 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC14.6□□□□□ -0.07
MDH1P40925 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
MDH1P40925 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
MDH1P40925 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
MDH1P40925 DAO-201ENST00000228476 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
MDH1P40925 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
MDH1P40925 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC14.6□□□□□ -0.07
MDH1P40925 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC14.6□□□□□ -0.07
MDH1P40925 TBC1D22B-201ENST00000373491 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
MDH1P40925 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
MDH1P40925 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.6□□□□□ -0.07
MDH1P40925 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC14.59□□□□□ -0.07
MDH1P40925 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC14.59□□□□□ -0.07
MDH1P40925 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
MDH1P40925 IL10-202ENST00000423557 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
MDH1P40925 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.59□□□□□ -0.07
MDH1P40925 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
MDH1P40925 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
MDH1P40925 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC14.59□□□□□ -0.07
MDH1P40925 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
MDH1P40925 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
MDH1P40925 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
MDH1P40925 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms