Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
CKS2P33552 AHI1-205ENST00000457866 5549 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
CKS2P33552 SIRPA-204ENST00000622179 4570 ntAPPRIS ALT1 TSL 5 BASIC10.75□□□□□ -0.69
CKS2P33552 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CKS2P33552 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
CKS2P33552 DMTF1-202ENST00000394703 4038 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CKS2P33552 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CKS2P33552 HSPA12A-201ENST00000369209 5722 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
CKS2P33552 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
CKS2P33552 RAD1-203ENST00000382038 5770 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CKS2P33552 OR2V2-202ENST00000641492 4777 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
CKS2P33552 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC10.75□□□□□ -0.69
CKS2P33552 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
CKS2P33552 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CKS2P33552 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CKS2P33552 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC10.75□□□□□ -0.69
CKS2P33552 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
CKS2P33552 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC10.75□□□□□ -0.69
CKS2P33552 DAPK1-201ENST00000358077 5743 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CKS2P33552 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
CKS2P33552 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC10.74□□□□□ -0.69
CKS2P33552 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC10.74□□□□□ -0.69
CKS2P33552 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
CKS2P33552 ADNP-203ENST00000396029 6261 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CKS2P33552 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
CKS2P33552 MKL1-211ENST00000618196 4248 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CKS2P33552 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
CKS2P33552 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
CKS2P33552 OS9-206ENST00000435406 2346 ntTSL 2 BASIC10.74□□□□□ -0.69
CKS2P33552 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC10.74□□□□□ -0.69
CKS2P33552 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
CKS2P33552 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC10.74□□□□□ -0.69
CKS2P33552 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
CKS2P33552 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
CKS2P33552 PAX7-203ENST00000420770 5538 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CKS2P33552 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC10.74□□□□□ -0.69
CKS2P33552 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CKS2P33552 AL158070.2-201ENST00000623713 1621 ntBASIC10.74□□□□□ -0.69
CKS2P33552 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC10.74□□□□□ -0.69
CKS2P33552 NPAP1-201ENST00000329468 7526 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
CKS2P33552 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CKS2P33552 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
CKS2P33552 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CKS2P33552 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
CKS2P33552 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
CKS2P33552 HLA-K-203ENST00000430151 1046 ntBASIC10.74□□□□□ -0.69
CKS2P33552 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
CKS2P33552 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC10.74□□□□□ -0.69
CKS2P33552 AC069335.1-201ENST00000489972 472 ntBASIC10.74□□□□□ -0.69
CKS2P33552 RNA5SP416-201ENST00000516838 111 ntBASIC10.74□□□□□ -0.69
CKS2P33552 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
CKS2P33552 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC10.74□□□□□ -0.69
CKS2P33552 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC10.74□□□□□ -0.69
CKS2P33552 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC10.74□□□□□ -0.69
CKS2P33552 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC10.74□□□□□ -0.69
CKS2P33552 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC10.74□□□□□ -0.69
CKS2P33552 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
CKS2P33552 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
CKS2P33552 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
CKS2P33552 HFE2-206ENST00000634927 506 ntTSL 4 BASIC10.74□□□□□ -0.69
CKS2P33552 BCL2L11-217ENST00000610735 5120 ntTSL 5 BASIC10.74□□□□□ -0.69
CKS2P33552 STK25-235ENST00000543554 2556 ntTSL 2 BASIC10.74□□□□□ -0.69
CKS2P33552 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
CKS2P33552 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC10.74□□□□□ -0.69
CKS2P33552 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
CKS2P33552 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
CKS2P33552 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
CKS2P33552 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CKS2P33552 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CKS2P33552 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
CKS2P33552 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC10.74□□□□□ -0.69
CKS2P33552 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
CKS2P33552 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CKS2P33552 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
CKS2P33552 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC10.74□□□□□ -0.69
CKS2P33552 MCFD2-212ENST00000444761 4169 ntTSL 2 BASIC10.74□□□□□ -0.69
CKS2P33552 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC10.74□□□□□ -0.69
CKS2P33552 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC10.74□□□□□ -0.69
CKS2P33552 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CKS2P33552 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
CKS2P33552 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CKS2P33552 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
CKS2P33552 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC10.74□□□□□ -0.69
CKS2P33552 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC10.74□□□□□ -0.69
CKS2P33552 CACNA2D2-205ENST00000429770 5304 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
CKS2P33552 ESYT1-202ENST00000394048 4388 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
CKS2P33552 SLC35F1-201ENST00000360388 4852 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
CKS2P33552 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
CKS2P33552 LINC00567-201ENST00000569854 3409 ntBASIC10.74□□□□□ -0.69
CKS2P33552 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CKS2P33552 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CKS2P33552 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
CKS2P33552 MBNL1-AS1-202ENST00000608395 6585 ntTSL 2 BASIC10.74□□□□□ -0.69
CKS2P33552 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC10.74□□□□□ -0.69
CKS2P33552 DGKZ-204ENST00000454345 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
CKS2P33552 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
CKS2P33552 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CKS2P33552 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CKS2P33552 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC10.73□□□□□ -0.69
CKS2P33552 AC135782.3-201ENST00000562782 2105 ntBASIC10.73□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms