Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 MIR6769A-201ENST00000617340 73 ntBASIC16.26■□□□□ 0.19
CIITAP33076 CU633904.3-201ENST00000624042 1029 ntBASIC16.26■□□□□ 0.19
CIITAP33076 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC16.26■□□□□ 0.19
CIITAP33076 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
CIITAP33076 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC16.26■□□□□ 0.19
CIITAP33076 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CIITAP33076 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CIITAP33076 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC16.26■□□□□ 0.19
CIITAP33076 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC16.26■□□□□ 0.19
CIITAP33076 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CIITAP33076 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC16.26■□□□□ 0.19
CIITAP33076 LINC01815-202ENST00000641468 1409 ntBASIC16.26■□□□□ 0.19
CIITAP33076 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC16.26■□□□□ 0.19
CIITAP33076 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CIITAP33076 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CIITAP33076 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CIITAP33076 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC16.26■□□□□ 0.19
CIITAP33076 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CIITAP33076 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CIITAP33076 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC16.26■□□□□ 0.19
CIITAP33076 AC015909.3-201ENST00000572855 1794 ntBASIC16.26■□□□□ 0.19
CIITAP33076 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CIITAP33076 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CIITAP33076 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC16.25■□□□□ 0.19
CIITAP33076 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CIITAP33076 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CIITAP33076 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC16.25■□□□□ 0.19
CIITAP33076 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC16.25■□□□□ 0.19
CIITAP33076 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CIITAP33076 SHMT1P1-201ENST00000419974 1312 ntBASIC16.25■□□□□ 0.19
CIITAP33076 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CIITAP33076 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CIITAP33076 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC16.25■□□□□ 0.19
CIITAP33076 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CIITAP33076 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CIITAP33076 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CIITAP33076 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CIITAP33076 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC16.25■□□□□ 0.19
CIITAP33076 ELK2AP-201ENST00000392510 1007 ntBASIC16.25■□□□□ 0.19
CIITAP33076 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC16.25■□□□□ 0.19
CIITAP33076 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CIITAP33076 RPS9P1-201ENST00000419943 583 ntBASIC16.25■□□□□ 0.19
CIITAP33076 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC16.25■□□□□ 0.19
CIITAP33076 DUX4L50-201ENST00000455245 715 ntBASIC16.25■□□□□ 0.19
CIITAP33076 PFN2-206ENST00000461930 606 ntTSL 4 BASIC16.25■□□□□ 0.19
CIITAP33076 RN7SL277P-201ENST00000481521 288 ntBASIC16.25■□□□□ 0.19
CIITAP33076 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC16.25■□□□□ 0.19
CIITAP33076 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CIITAP33076 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC16.25■□□□□ 0.19
CIITAP33076 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC16.25■□□□□ 0.19
CIITAP33076 AL512310.5-201ENST00000551999 515 ntBASIC16.25■□□□□ 0.19
CIITAP33076 AC242376.1-201ENST00000559033 726 ntBASIC16.25■□□□□ 0.19
CIITAP33076 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC16.25■□□□□ 0.19
CIITAP33076 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC16.25■□□□□ 0.19
CIITAP33076 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CIITAP33076 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CIITAP33076 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CIITAP33076 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
CIITAP33076 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CIITAP33076 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
CIITAP33076 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.25■□□□□ 0.19
CIITAP33076 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CIITAP33076 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CIITAP33076 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CIITAP33076 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CIITAP33076 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CIITAP33076 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CIITAP33076 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CIITAP33076 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CIITAP33076 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC16.25■□□□□ 0.19
CIITAP33076 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CIITAP33076 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CIITAP33076 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CIITAP33076 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.24■□□□□ 0.19
CIITAP33076 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC16.24■□□□□ 0.19
CIITAP33076 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC16.24■□□□□ 0.19
CIITAP33076 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC16.24■□□□□ 0.19
CIITAP33076 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CIITAP33076 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CIITAP33076 AC016397.2-201ENST00000624848 1985 ntBASIC16.24■□□□□ 0.19
CIITAP33076 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
CIITAP33076 USP28-214ENST00000545540 3431 ntTSL 2 BASIC16.24■□□□□ 0.19
CIITAP33076 GOLGA8VP-201ENST00000559009 1798 ntBASIC16.24■□□□□ 0.19
CIITAP33076 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC16.24■□□□□ 0.19
CIITAP33076 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CIITAP33076 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CIITAP33076 MBP-201ENST00000354542 575 ntTSL 2 BASIC16.24■□□□□ 0.19
CIITAP33076 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CIITAP33076 USP17L6P-201ENST00000382470 1197 ntBASIC16.24■□□□□ 0.19
CIITAP33076 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC16.24■□□□□ 0.19
CIITAP33076 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC16.24■□□□□ 0.19
CIITAP33076 AL133466.1-201ENST00000447582 150 ntBASIC16.24■□□□□ 0.19
CIITAP33076 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC16.24■□□□□ 0.19
CIITAP33076 AC116345.2-201ENST00000512837 523 ntBASIC16.24■□□□□ 0.19
CIITAP33076 AC026803.1-201ENST00000569130 274 ntBASIC16.24■□□□□ 0.19
CIITAP33076 SKA2-205ENST00000580541 689 ntTSL 3 BASIC16.24■□□□□ 0.19
CIITAP33076 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CIITAP33076 AL021578.1-201ENST00000613646 709 ntBASIC16.24■□□□□ 0.19
CIITAP33076 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC16.24■□□□□ 0.19
CIITAP33076 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms