Protein–RNA interactions for Protein: P31260

HOXA10, Homeobox protein Hox-A10, humanhuman

Predicted RBP Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA10P31260 AP000244.1-201ENST00000424582 201 ntBASIC17.34■□□□□ 0.37
HOXA10P31260 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC17.34■□□□□ 0.37
HOXA10P31260 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC17.34■□□□□ 0.37
HOXA10P31260 TPT1P11-201ENST00000458482 498 ntBASIC17.34■□□□□ 0.37
HOXA10P31260 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
HOXA10P31260 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC17.34■□□□□ 0.37
HOXA10P31260 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC17.34■□□□□ 0.37
HOXA10P31260 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HOXA10P31260 AL022313.4-201ENST00000562756 2046 ntBASIC17.34■□□□□ 0.37
HOXA10P31260 AC027139.1-201ENST00000565286 951 ntBASIC17.34■□□□□ 0.37
HOXA10P31260 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
HOXA10P31260 FKBP4P8-201ENST00000610931 1369 ntBASIC17.34■□□□□ 0.37
HOXA10P31260 AL031673.1-201ENST00000611460 466 ntBASIC17.34■□□□□ 0.37
HOXA10P31260 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC17.34■□□□□ 0.37
HOXA10P31260 MARS-233ENST00000628866 2583 ntTSL 5 BASIC17.34■□□□□ 0.37
HOXA10P31260 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HOXA10P31260 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HOXA10P31260 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
HOXA10P31260 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
HOXA10P31260 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC17.33■□□□□ 0.37
HOXA10P31260 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
HOXA10P31260 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
HOXA10P31260 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
HOXA10P31260 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.33■□□□□ 0.37
HOXA10P31260 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HOXA10P31260 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HOXA10P31260 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC17.33■□□□□ 0.37
HOXA10P31260 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HOXA10P31260 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
HOXA10P31260 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.37
HOXA10P31260 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HOXA10P31260 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HOXA10P31260 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC17.33■□□□□ 0.36
HOXA10P31260 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HOXA10P31260 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC17.33■□□□□ 0.36
HOXA10P31260 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC17.33■□□□□ 0.36
HOXA10P31260 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
HOXA10P31260 HMGA1P1-201ENST00000415560 1062 ntBASIC17.33■□□□□ 0.36
HOXA10P31260 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC17.33■□□□□ 0.36
HOXA10P31260 AL080243.1-201ENST00000423293 1060 ntBASIC17.33■□□□□ 0.36
HOXA10P31260 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC17.33■□□□□ 0.36
HOXA10P31260 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC17.33■□□□□ 0.36
HOXA10P31260 NME6-208ENST00000435684 599 ntTSL 2 BASIC17.33■□□□□ 0.36
HOXA10P31260 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC17.33■□□□□ 0.36
HOXA10P31260 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC17.33■□□□□ 0.36
HOXA10P31260 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC17.33■□□□□ 0.36
HOXA10P31260 RN7SL147P-201ENST00000487345 298 ntBASIC17.33■□□□□ 0.36
HOXA10P31260 COQ10BP2-201ENST00000513804 724 ntBASIC17.33■□□□□ 0.36
HOXA10P31260 CASP3-205ENST00000517513 964 ntTSL 5 BASIC17.33■□□□□ 0.36
HOXA10P31260 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC17.33■□□□□ 0.36
HOXA10P31260 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC17.33■□□□□ 0.36
HOXA10P31260 AC023968.2-201ENST00000560593 1049 ntBASIC17.33■□□□□ 0.36
HOXA10P31260 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC17.33■□□□□ 0.36
HOXA10P31260 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HOXA10P31260 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC17.33■□□□□ 0.36
HOXA10P31260 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC17.33■□□□□ 0.36
HOXA10P31260 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC17.33■□□□□ 0.36
HOXA10P31260 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC17.33■□□□□ 0.36
HOXA10P31260 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC17.33■□□□□ 0.36
HOXA10P31260 AC005274.1-201ENST00000623460 802 ntBASIC17.33■□□□□ 0.36
HOXA10P31260 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HOXA10P31260 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
HOXA10P31260 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HOXA10P31260 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HOXA10P31260 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
HOXA10P31260 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HOXA10P31260 AC090505.1-201ENST00000430515 1834 ntBASIC17.33■□□□□ 0.36
HOXA10P31260 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC17.33■□□□□ 0.36
HOXA10P31260 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HOXA10P31260 RN7SL832P-201ENST00000607781 1756 ntBASIC17.33■□□□□ 0.36
HOXA10P31260 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
HOXA10P31260 WARS-203ENST00000358655 2466 ntTSL 2 BASIC17.32■□□□□ 0.36
HOXA10P31260 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
HOXA10P31260 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HOXA10P31260 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
HOXA10P31260 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HOXA10P31260 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
HOXA10P31260 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.32■□□□□ 0.36
HOXA10P31260 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HOXA10P31260 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC17.32■□□□□ 0.36
HOXA10P31260 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC17.32■□□□□ 0.36
HOXA10P31260 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC17.32■□□□□ 0.36
HOXA10P31260 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
HOXA10P31260 AF274858.1-201ENST00000406288 372 ntBASIC17.32■□□□□ 0.36
HOXA10P31260 ACTBP14-201ENST00000411655 1089 ntBASIC17.32■□□□□ 0.36
HOXA10P31260 AL512599.1-201ENST00000430724 685 ntBASIC17.32■□□□□ 0.36
HOXA10P31260 HNRNPA1P2-207ENST00000432375 960 ntBASIC17.32■□□□□ 0.36
HOXA10P31260 EEF1DP2-201ENST00000433698 843 ntBASIC17.32■□□□□ 0.36
HOXA10P31260 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC17.32■□□□□ 0.36
HOXA10P31260 KNOP1P1-201ENST00000542108 989 ntBASIC17.32■□□□□ 0.36
HOXA10P31260 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC17.32■□□□□ 0.36
HOXA10P31260 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
HOXA10P31260 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HOXA10P31260 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC17.32■□□□□ 0.36
HOXA10P31260 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC17.32■□□□□ 0.36
HOXA10P31260 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HOXA10P31260 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
HOXA10P31260 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC17.32■□□□□ 0.36
HOXA10P31260 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
HOXA10P31260 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms