Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
PTPN6P29350 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PTPN6P29350 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC13.81□□□□□ -0.2
PTPN6P29350 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
PTPN6P29350 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC13.81□□□□□ -0.2
PTPN6P29350 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PTPN6P29350 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
PTPN6P29350 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
PTPN6P29350 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PTPN6P29350 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PTPN6P29350 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PTPN6P29350 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
PTPN6P29350 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PTPN6P29350 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
PTPN6P29350 STX1A-203ENST00000395155 783 ntTSL 2 BASIC13.81□□□□□ -0.2
PTPN6P29350 MPV17-206ENST00000402722 827 ntTSL 3 BASIC13.81□□□□□ -0.2
PTPN6P29350 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC13.81□□□□□ -0.2
PTPN6P29350 FAM197Y7-201ENST00000432892 766 ntBASIC13.81□□□□□ -0.2
PTPN6P29350 AL161932.2-201ENST00000435436 679 ntBASIC13.81□□□□□ -0.2
PTPN6P29350 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC13.81□□□□□ -0.2
PTPN6P29350 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC13.81□□□□□ -0.2
PTPN6P29350 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC13.81□□□□□ -0.2
PTPN6P29350 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC13.81□□□□□ -0.2
PTPN6P29350 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC13.81□□□□□ -0.2
PTPN6P29350 MIR6752-201ENST00000618442 71 ntBASIC13.81□□□□□ -0.2
PTPN6P29350 ETV2-208ENST00000621247 941 ntTSL 5 BASIC13.81□□□□□ -0.2
PTPN6P29350 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
PTPN6P29350 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
PTPN6P29350 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PTPN6P29350 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PTPN6P29350 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PTPN6P29350 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PTPN6P29350 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.81□□□□□ -0.2
PTPN6P29350 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PTPN6P29350 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PTPN6P29350 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PTPN6P29350 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PTPN6P29350 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PTPN6P29350 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
PTPN6P29350 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PTPN6P29350 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PTPN6P29350 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PTPN6P29350 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC13.81□□□□□ -0.2
PTPN6P29350 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC13.8□□□□□ -0.2
PTPN6P29350 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC13.8□□□□□ -0.2
PTPN6P29350 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
PTPN6P29350 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
PTPN6P29350 TCAF1P1-201ENST00000414990 2232 ntBASIC13.8□□□□□ -0.2
PTPN6P29350 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PTPN6P29350 AC073548.1-201ENST00000624088 1882 ntBASIC13.8□□□□□ -0.2
PTPN6P29350 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
PTPN6P29350 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC13.8□□□□□ -0.2
PTPN6P29350 AC015909.5-201ENST00000624336 2266 ntBASIC13.8□□□□□ -0.2
PTPN6P29350 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
PTPN6P29350 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PTPN6P29350 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PTPN6P29350 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
PTPN6P29350 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC13.8□□□□□ -0.2
PTPN6P29350 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
PTPN6P29350 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC13.8□□□□□ -0.2
PTPN6P29350 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.8□□□□□ -0.2
PTPN6P29350 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PTPN6P29350 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PTPN6P29350 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
PTPN6P29350 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
PTPN6P29350 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PTPN6P29350 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC13.8□□□□□ -0.2
PTPN6P29350 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PTPN6P29350 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC13.8□□□□□ -0.2
PTPN6P29350 RNA5SP486-201ENST00000515961 83 ntBASIC13.8□□□□□ -0.2
PTPN6P29350 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
PTPN6P29350 AC078819.1-201ENST00000547454 765 ntBASIC13.8□□□□□ -0.2
PTPN6P29350 AC012085.1-201ENST00000548270 765 ntBASIC13.8□□□□□ -0.2
PTPN6P29350 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC13.8□□□□□ -0.2
PTPN6P29350 AC027237.1-201ENST00000560942 655 ntBASIC13.8□□□□□ -0.2
PTPN6P29350 AC106820.3-201ENST00000561653 397 ntBASIC13.8□□□□□ -0.2
PTPN6P29350 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC13.8□□□□□ -0.2
PTPN6P29350 NAA38-206ENST00000576384 424 ntTSL 2 BASIC13.8□□□□□ -0.2
PTPN6P29350 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC13.8□□□□□ -0.2
PTPN6P29350 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC13.8□□□□□ -0.2
PTPN6P29350 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC13.8□□□□□ -0.2
PTPN6P29350 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PTPN6P29350 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC13.8□□□□□ -0.2
PTPN6P29350 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC13.8□□□□□ -0.2
PTPN6P29350 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
PTPN6P29350 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
PTPN6P29350 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
PTPN6P29350 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC13.8□□□□□ -0.2
PTPN6P29350 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC13.8□□□□□ -0.2
PTPN6P29350 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC13.8□□□□□ -0.2
PTPN6P29350 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
PTPN6P29350 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC13.8□□□□□ -0.2
PTPN6P29350 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PTPN6P29350 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.8□□□□□ -0.2
PTPN6P29350 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC13.79□□□□□ -0.2
PTPN6P29350 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
PTPN6P29350 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC13.79□□□□□ -0.2
PTPN6P29350 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PTPN6P29350 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PTPN6P29350 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms