Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC12.51□□□□□ -0.41
CD40P25942 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CD40P25942 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC12.51□□□□□ -0.41
CD40P25942 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CD40P25942 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
CD40P25942 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CD40P25942 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC12.51□□□□□ -0.41
CD40P25942 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
CD40P25942 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CD40P25942 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CD40P25942 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC12.51□□□□□ -0.41
CD40P25942 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC12.51□□□□□ -0.41
CD40P25942 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC12.51□□□□□ -0.41
CD40P25942 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CD40P25942 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CD40P25942 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
CD40P25942 AC015909.3-201ENST00000572855 1794 ntBASIC12.51□□□□□ -0.41
CD40P25942 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CD40P25942 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CD40P25942 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC12.51□□□□□ -0.41
CD40P25942 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
CD40P25942 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC12.5□□□□□ -0.41
CD40P25942 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CD40P25942 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC12.5□□□□□ -0.41
CD40P25942 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC12.5□□□□□ -0.41
CD40P25942 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC12.5□□□□□ -0.41
CD40P25942 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CD40P25942 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
CD40P25942 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CD40P25942 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CD40P25942 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CD40P25942 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CD40P25942 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CD40P25942 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CD40P25942 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CD40P25942 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CD40P25942 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CD40P25942 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CD40P25942 MBP-201ENST00000354542 575 ntTSL 2 BASIC12.5□□□□□ -0.41
CD40P25942 RNA5SP359-201ENST00000364838 113 ntBASIC12.5□□□□□ -0.41
CD40P25942 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC12.5□□□□□ -0.41
CD40P25942 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC12.5□□□□□ -0.41
CD40P25942 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC12.5□□□□□ -0.41
CD40P25942 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC12.5□□□□□ -0.41
CD40P25942 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC12.5□□□□□ -0.41
CD40P25942 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC12.5□□□□□ -0.41
CD40P25942 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC12.5□□□□□ -0.41
CD40P25942 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CD40P25942 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC12.5□□□□□ -0.41
CD40P25942 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CD40P25942 FOS-206ENST00000555347 1280 ntTSL 2 BASIC12.5□□□□□ -0.41
CD40P25942 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
CD40P25942 AC140658.4-201ENST00000561990 352 ntBASIC12.5□□□□□ -0.41
CD40P25942 STUB1-204ENST00000564370 875 ntTSL 2 BASIC12.5□□□□□ -0.41
CD40P25942 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
CD40P25942 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC12.5□□□□□ -0.41
CD40P25942 AL133499.1-201ENST00000596207 608 ntBASIC12.5□□□□□ -0.41
CD40P25942 AC016629.1-201ENST00000596579 586 ntBASIC12.5□□□□□ -0.41
CD40P25942 AL109837.1-201ENST00000603272 613 ntBASIC12.5□□□□□ -0.41
CD40P25942 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CD40P25942 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC12.5□□□□□ -0.41
CD40P25942 MEG3_2.1-201ENST00000611456 105 ntBASIC12.5□□□□□ -0.41
CD40P25942 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC12.5□□□□□ -0.41
CD40P25942 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CD40P25942 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC12.5□□□□□ -0.41
CD40P25942 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC12.5□□□□□ -0.41
CD40P25942 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CD40P25942 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC12.5□□□□□ -0.41
CD40P25942 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
CD40P25942 TBC1D3J-201ENST00000620719 1426 ntBASIC12.5□□□□□ -0.41
CD40P25942 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC12.5□□□□□ -0.41
CD40P25942 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CD40P25942 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC12.5□□□□□ -0.41
CD40P25942 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
CD40P25942 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CD40P25942 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC12.5□□□□□ -0.41
CD40P25942 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC12.5□□□□□ -0.41
CD40P25942 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CD40P25942 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CD40P25942 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
CD40P25942 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CD40P25942 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
CD40P25942 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
CD40P25942 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CD40P25942 TNRC18P2-201ENST00000417666 2714 ntBASIC12.5□□□□□ -0.41
CD40P25942 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC12.5□□□□□ -0.41
CD40P25942 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CD40P25942 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
CD40P25942 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CD40P25942 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC12.49□□□□□ -0.41
CD40P25942 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CD40P25942 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CD40P25942 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CD40P25942 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC12.49□□□□□ -0.41
CD40P25942 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC12.49□□□□□ -0.41
CD40P25942 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC12.49□□□□□ -0.41
CD40P25942 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC12.49□□□□□ -0.41
CD40P25942 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC12.49□□□□□ -0.41
CD40P25942 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CD40P25942 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms