Protein–RNA interactions for Protein: P24046

GABRR1, Gamma-aminobutyric acid receptor subunit rho-1, humanhuman

Predictions only

Length 479 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRR1P24046 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC12.6□□□□□ -0.39
GABRR1P24046 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC12.6□□□□□ -0.39
GABRR1P24046 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
GABRR1P24046 AC020910.6-201ENST00000623084 1459 ntBASIC12.6□□□□□ -0.39
GABRR1P24046 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
GABRR1P24046 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
GABRR1P24046 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
GABRR1P24046 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC12.6□□□□□ -0.39
GABRR1P24046 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
GABRR1P24046 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
GABRR1P24046 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
GABRR1P24046 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
GABRR1P24046 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
GABRR1P24046 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
GABRR1P24046 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
GABRR1P24046 MGST3-203ENST00000367885 680 ntTSL 2 BASIC12.6□□□□□ -0.39
GABRR1P24046 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
GABRR1P24046 AP006294.1-201ENST00000415407 339 ntBASIC12.6□□□□□ -0.39
GABRR1P24046 TLE1P1-201ENST00000422965 589 ntBASIC12.6□□□□□ -0.39
GABRR1P24046 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC12.6□□□□□ -0.39
GABRR1P24046 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC12.6□□□□□ -0.39
GABRR1P24046 CRB3P1-201ENST00000449338 276 ntBASIC12.6□□□□□ -0.39
GABRR1P24046 AC093433.1-201ENST00000458048 571 ntBASIC12.6□□□□□ -0.39
GABRR1P24046 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
GABRR1P24046 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC12.6□□□□□ -0.39
GABRR1P24046 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
GABRR1P24046 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC12.6□□□□□ -0.39
GABRR1P24046 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
GABRR1P24046 ABBA01031660.1-201ENST00000635219 756 ntBASIC12.6□□□□□ -0.39
GABRR1P24046 AL603764.1-201ENST00000636452 321 ntBASIC12.6□□□□□ -0.39
GABRR1P24046 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
GABRR1P24046 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC12.6□□□□□ -0.39
GABRR1P24046 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
GABRR1P24046 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC12.6□□□□□ -0.39
GABRR1P24046 AC011498.7-201ENST00000624986 2027 ntBASIC12.6□□□□□ -0.39
GABRR1P24046 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
GABRR1P24046 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
GABRR1P24046 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC12.6□□□□□ -0.39
GABRR1P24046 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
GABRR1P24046 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
GABRR1P24046 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
GABRR1P24046 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
GABRR1P24046 KRT8P24-201ENST00000560290 1559 ntBASIC12.6□□□□□ -0.39
GABRR1P24046 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
GABRR1P24046 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
GABRR1P24046 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
GABRR1P24046 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
GABRR1P24046 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
GABRR1P24046 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
GABRR1P24046 MAPT-IT1-201ENST00000624111 3016 ntBASIC12.59□□□□□ -0.39
GABRR1P24046 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
GABRR1P24046 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
GABRR1P24046 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
GABRR1P24046 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC12.59□□□□□ -0.39
GABRR1P24046 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
GABRR1P24046 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
GABRR1P24046 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC12.59□□□□□ -0.39
GABRR1P24046 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
GABRR1P24046 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
GABRR1P24046 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
GABRR1P24046 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
GABRR1P24046 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
GABRR1P24046 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
GABRR1P24046 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
GABRR1P24046 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
GABRR1P24046 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC12.59□□□□□ -0.39
GABRR1P24046 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
GABRR1P24046 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
GABRR1P24046 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
GABRR1P24046 ACTBP8-201ENST00000403258 1108 ntBASIC12.59□□□□□ -0.39
GABRR1P24046 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
GABRR1P24046 HMGN1P19-201ENST00000436976 333 ntBASIC12.59□□□□□ -0.39
GABRR1P24046 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
GABRR1P24046 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
GABRR1P24046 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC12.59□□□□□ -0.39
GABRR1P24046 TDH-203ENST00000531764 1110 ntBASIC12.59□□□□□ -0.39
GABRR1P24046 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
GABRR1P24046 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC12.59□□□□□ -0.39
GABRR1P24046 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC12.59□□□□□ -0.39
GABRR1P24046 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC12.59□□□□□ -0.39
GABRR1P24046 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC12.59□□□□□ -0.39
GABRR1P24046 AC004899.2-201ENST00000622993 3860 ntBASIC12.59□□□□□ -0.39
GABRR1P24046 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
GABRR1P24046 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC12.59□□□□□ -0.39
GABRR1P24046 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC12.59□□□□□ -0.39
GABRR1P24046 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
GABRR1P24046 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC12.59□□□□□ -0.39
GABRR1P24046 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
GABRR1P24046 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
GABRR1P24046 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
GABRR1P24046 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
GABRR1P24046 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
GABRR1P24046 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
GABRR1P24046 AC130686.1-201ENST00000622936 2466 ntBASIC12.59□□□□□ -0.39
GABRR1P24046 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
GABRR1P24046 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC12.58□□□□□ -0.39
GABRR1P24046 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC12.58□□□□□ -0.39
GABRR1P24046 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
GABRR1P24046 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
GABRR1P24046 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms