Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 AC020910.5-201ENST00000623668 1865 ntBASIC13.8□□□□□ -0.2
NCK1P16333 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NCK1P16333 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
NCK1P16333 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
NCK1P16333 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NCK1P16333 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
NCK1P16333 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
NCK1P16333 AMT-232ENST00000636199 1546 ntTSL 5 BASIC13.8□□□□□ -0.2
NCK1P16333 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
NCK1P16333 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC13.79□□□□□ -0.2
NCK1P16333 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NCK1P16333 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NCK1P16333 PCDHA6-201ENST00000378126 3267 ntBASIC13.79□□□□□ -0.2
NCK1P16333 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
NCK1P16333 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NCK1P16333 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
NCK1P16333 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NCK1P16333 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
NCK1P16333 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NCK1P16333 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NCK1P16333 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
NCK1P16333 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NCK1P16333 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC13.79□□□□□ -0.2
NCK1P16333 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
NCK1P16333 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
NCK1P16333 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC13.79□□□□□ -0.2
NCK1P16333 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NCK1P16333 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
NCK1P16333 PCDHB18P-202ENST00000526308 3197 ntBASIC13.79□□□□□ -0.2
NCK1P16333 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NCK1P16333 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NCK1P16333 C1QBPP1-201ENST00000400117 770 ntBASIC13.79□□□□□ -0.2
NCK1P16333 MIR943-201ENST00000401286 94 ntBASIC13.79□□□□□ -0.2
NCK1P16333 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC13.79□□□□□ -0.2
NCK1P16333 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC13.79□□□□□ -0.2
NCK1P16333 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC13.79□□□□□ -0.2
NCK1P16333 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC13.79□□□□□ -0.2
NCK1P16333 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC13.79□□□□□ -0.2
NCK1P16333 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC13.79□□□□□ -0.2
NCK1P16333 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC13.79□□□□□ -0.2
NCK1P16333 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
NCK1P16333 AP001002.3-201ENST00000623482 206 ntBASIC13.79□□□□□ -0.2
NCK1P16333 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NCK1P16333 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NCK1P16333 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
NCK1P16333 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NCK1P16333 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
NCK1P16333 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NCK1P16333 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NCK1P16333 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC13.79□□□□□ -0.2
NCK1P16333 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NCK1P16333 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC13.79□□□□□ -0.2
NCK1P16333 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NCK1P16333 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC13.79□□□□□ -0.2
NCK1P16333 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NCK1P16333 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
NCK1P16333 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
NCK1P16333 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
NCK1P16333 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
NCK1P16333 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC13.79□□□□□ -0.2
NCK1P16333 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
NCK1P16333 AL928654.5-201ENST00000624831 2501 ntBASIC13.79□□□□□ -0.2
NCK1P16333 TET3-201ENST00000305799 5174 ntTSL 5 BASIC13.78□□□□□ -0.2
NCK1P16333 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NCK1P16333 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NCK1P16333 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NCK1P16333 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
NCK1P16333 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
NCK1P16333 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
NCK1P16333 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NCK1P16333 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NCK1P16333 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NCK1P16333 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC13.78□□□□□ -0.2
NCK1P16333 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC13.78□□□□□ -0.2
NCK1P16333 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NCK1P16333 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
NCK1P16333 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
NCK1P16333 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC13.78□□□□□ -0.2
NCK1P16333 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NCK1P16333 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
NCK1P16333 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NCK1P16333 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.78□□□□□ -0.2
NCK1P16333 DNAJB3-202ENST00000449667 1266 ntBASIC13.78□□□□□ -0.2
NCK1P16333 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC13.78□□□□□ -0.2
NCK1P16333 AC004967.1-201ENST00000453589 447 ntBASIC13.78□□□□□ -0.2
NCK1P16333 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC13.78□□□□□ -0.2
NCK1P16333 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC13.78□□□□□ -0.2
NCK1P16333 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC13.78□□□□□ -0.2
NCK1P16333 MIR8072-201ENST00000614241 80 ntBASIC13.78□□□□□ -0.2
NCK1P16333 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC13.78□□□□□ -0.2
NCK1P16333 AL603764.1-201ENST00000636452 321 ntBASIC13.78□□□□□ -0.2
NCK1P16333 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC13.78□□□□□ -0.2
NCK1P16333 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
NCK1P16333 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NCK1P16333 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC13.78□□□□□ -0.2
NCK1P16333 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NCK1P16333 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NCK1P16333 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NCK1P16333 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
NCK1P16333 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms