Protein–RNA interactions for Protein: P11279

LAMP1, Lysosome-associated membrane glycoprotein 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1P11279 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LAMP1P11279 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
LAMP1P11279 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LAMP1P11279 KRT8P4-201ENST00000509735 1454 ntBASIC13.8□□□□□ -0.2
LAMP1P11279 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LAMP1P11279 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
LAMP1P11279 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
LAMP1P11279 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LAMP1P11279 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LAMP1P11279 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC13.79□□□□□ -0.2
LAMP1P11279 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LAMP1P11279 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC13.79□□□□□ -0.2
LAMP1P11279 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LAMP1P11279 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
LAMP1P11279 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC13.79□□□□□ -0.2
LAMP1P11279 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LAMP1P11279 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LAMP1P11279 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
LAMP1P11279 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LAMP1P11279 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LAMP1P11279 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC13.79□□□□□ -0.2
LAMP1P11279 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LAMP1P11279 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC13.79□□□□□ -0.2
LAMP1P11279 LINC02486-201ENST00000604157 3000 ntBASIC13.79□□□□□ -0.2
LAMP1P11279 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LAMP1P11279 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
LAMP1P11279 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LAMP1P11279 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LAMP1P11279 AL136309.1-201ENST00000403917 691 ntBASIC13.79□□□□□ -0.2
LAMP1P11279 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC13.79□□□□□ -0.2
LAMP1P11279 RGS5-214ENST00000429865 754 ntTSL 3 BASIC13.79□□□□□ -0.2
LAMP1P11279 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC13.79□□□□□ -0.2
LAMP1P11279 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC13.79□□□□□ -0.2
LAMP1P11279 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC13.79□□□□□ -0.2
LAMP1P11279 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC13.79□□□□□ -0.2
LAMP1P11279 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC13.79□□□□□ -0.2
LAMP1P11279 IGHV3-72-202ENST00000621503 303 ntBASIC13.79□□□□□ -0.2
LAMP1P11279 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC13.79□□□□□ -0.2
LAMP1P11279 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC13.79□□□□□ -0.2
LAMP1P11279 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
LAMP1P11279 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LAMP1P11279 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LAMP1P11279 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LAMP1P11279 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LAMP1P11279 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC13.79□□□□□ -0.2
LAMP1P11279 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.79□□□□□ -0.2
LAMP1P11279 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
LAMP1P11279 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LAMP1P11279 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LAMP1P11279 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LAMP1P11279 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
LAMP1P11279 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
LAMP1P11279 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LAMP1P11279 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
LAMP1P11279 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC13.79□□□□□ -0.2
LAMP1P11279 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LAMP1P11279 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LAMP1P11279 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
LAMP1P11279 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC13.78□□□□□ -0.2
LAMP1P11279 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC13.78□□□□□ -0.2
LAMP1P11279 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
LAMP1P11279 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC13.78□□□□□ -0.2
LAMP1P11279 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LAMP1P11279 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC13.78□□□□□ -0.2
LAMP1P11279 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LAMP1P11279 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
LAMP1P11279 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LAMP1P11279 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
LAMP1P11279 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
LAMP1P11279 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
LAMP1P11279 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LAMP1P11279 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LAMP1P11279 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
LAMP1P11279 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LAMP1P11279 CICP17-201ENST00000418553 2377 ntBASIC13.78□□□□□ -0.2
LAMP1P11279 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LAMP1P11279 AC006001.1-201ENST00000325130 474 ntBASIC13.78□□□□□ -0.2
LAMP1P11279 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LAMP1P11279 MIR1202-201ENST00000408529 83 ntBASIC13.78□□□□□ -0.2
LAMP1P11279 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC13.78□□□□□ -0.2
LAMP1P11279 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LAMP1P11279 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LAMP1P11279 IGHVIII-5-2-201ENST00000522505 261 ntBASIC13.78□□□□□ -0.2
LAMP1P11279 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LAMP1P11279 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC13.78□□□□□ -0.2
LAMP1P11279 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC13.78□□□□□ -0.2
LAMP1P11279 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC13.78□□□□□ -0.2
LAMP1P11279 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC13.78□□□□□ -0.2
LAMP1P11279 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC13.78□□□□□ -0.2
LAMP1P11279 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LAMP1P11279 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LAMP1P11279 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LAMP1P11279 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LAMP1P11279 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC13.78□□□□□ -0.2
LAMP1P11279 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
LAMP1P11279 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LAMP1P11279 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LAMP1P11279 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LAMP1P11279 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC13.78□□□□□ -0.2
LAMP1P11279 CETP-203ENST00000566128 1733 ntTSL 5 BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms