Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HOXC6P09630 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.22■□□□□ 0.19
HOXC6P09630 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HOXC6P09630 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HOXC6P09630 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HOXC6P09630 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HOXC6P09630 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.22■□□□□ 0.19
HOXC6P09630 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HOXC6P09630 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
HOXC6P09630 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HOXC6P09630 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HOXC6P09630 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HOXC6P09630 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.22■□□□□ 0.19
HOXC6P09630 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HOXC6P09630 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HOXC6P09630 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HOXC6P09630 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
HOXC6P09630 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HOXC6P09630 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
HOXC6P09630 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.21■□□□□ 0.19
HOXC6P09630 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC16.21■□□□□ 0.19
HOXC6P09630 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
HOXC6P09630 AC067931.2-201ENST00000623655 2003 ntBASIC16.21■□□□□ 0.19
HOXC6P09630 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC16.21■□□□□ 0.19
HOXC6P09630 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HOXC6P09630 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.21■□□□□ 0.19
HOXC6P09630 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HOXC6P09630 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
HOXC6P09630 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
HOXC6P09630 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HOXC6P09630 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HOXC6P09630 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC16.21■□□□□ 0.19
HOXC6P09630 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HOXC6P09630 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC16.21■□□□□ 0.19
HOXC6P09630 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HOXC6P09630 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HOXC6P09630 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC16.21■□□□□ 0.19
HOXC6P09630 AC006987.1-201ENST00000413610 527 ntBASIC16.21■□□□□ 0.19
HOXC6P09630 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
HOXC6P09630 AL161932.2-201ENST00000435436 679 ntBASIC16.21■□□□□ 0.19
HOXC6P09630 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HOXC6P09630 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
HOXC6P09630 RN7SL494P-201ENST00000461517 304 ntBASIC16.21■□□□□ 0.19
HOXC6P09630 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HOXC6P09630 IGHV1-12-201ENST00000518307 205 ntBASIC16.21■□□□□ 0.19
HOXC6P09630 AC012158.2-201ENST00000536546 354 ntBASIC16.21■□□□□ 0.19
HOXC6P09630 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HOXC6P09630 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC16.21■□□□□ 0.19
HOXC6P09630 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC16.21■□□□□ 0.19
HOXC6P09630 SNORD3B-1-201ENST00000577988 758 ntBASIC16.21■□□□□ 0.19
HOXC6P09630 ST5-261ENST00000626808 1071 ntTSL 5 BASIC16.21■□□□□ 0.19
HOXC6P09630 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HOXC6P09630 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HOXC6P09630 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HOXC6P09630 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.21■□□□□ 0.19
HOXC6P09630 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC16.21■□□□□ 0.19
HOXC6P09630 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC16.21■□□□□ 0.18
HOXC6P09630 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
HOXC6P09630 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
HOXC6P09630 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
HOXC6P09630 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
HOXC6P09630 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC16.21■□□□□ 0.18
HOXC6P09630 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.21■□□□□ 0.18
HOXC6P09630 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HOXC6P09630 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC16.2■□□□□ 0.18
HOXC6P09630 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HOXC6P09630 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
HOXC6P09630 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HOXC6P09630 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HOXC6P09630 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
HOXC6P09630 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
HOXC6P09630 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
HOXC6P09630 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
HOXC6P09630 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HOXC6P09630 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HOXC6P09630 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
HOXC6P09630 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HOXC6P09630 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
HOXC6P09630 BX679664.3-201ENST00000414070 555 ntBASIC16.2■□□□□ 0.18
HOXC6P09630 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC16.2■□□□□ 0.18
HOXC6P09630 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HOXC6P09630 AC113935.1-201ENST00000471722 555 ntBASIC16.2■□□□□ 0.18
HOXC6P09630 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC16.2■□□□□ 0.18
HOXC6P09630 SORD2P-201ENST00000558556 1069 ntBASIC16.2■□□□□ 0.18
HOXC6P09630 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC16.2■□□□□ 0.18
HOXC6P09630 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC16.2■□□□□ 0.18
HOXC6P09630 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC16.2■□□□□ 0.18
HOXC6P09630 AL021707.6-201ENST00000609212 491 ntBASIC16.2■□□□□ 0.18
HOXC6P09630 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
HOXC6P09630 MIR6746-201ENST00000620971 63 ntBASIC16.2■□□□□ 0.18
HOXC6P09630 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
HOXC6P09630 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
HOXC6P09630 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC16.2■□□□□ 0.18
HOXC6P09630 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC16.2■□□□□ 0.18
HOXC6P09630 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC16.2■□□□□ 0.18
HOXC6P09630 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HOXC6P09630 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC16.2■□□□□ 0.18
HOXC6P09630 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
HOXC6P09630 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
HOXC6P09630 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms