Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RETP07949 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
RETP07949 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RETP07949 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RETP07949 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.65□□□□□ -0.06
RETP07949 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
RETP07949 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RETP07949 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RETP07949 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
RETP07949 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RETP07949 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC14.65□□□□□ -0.06
RETP07949 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
RETP07949 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.65□□□□□ -0.06
RETP07949 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RETP07949 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RETP07949 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RETP07949 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.65□□□□□ -0.06
RETP07949 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC14.65□□□□□ -0.06
RETP07949 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC14.65□□□□□ -0.06
RETP07949 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RETP07949 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC14.65□□□□□ -0.06
RETP07949 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC14.65□□□□□ -0.06
RETP07949 RN7SL470P-201ENST00000583069 259 ntBASIC14.65□□□□□ -0.06
RETP07949 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
RETP07949 AC025262.2-201ENST00000623975 1056 ntBASIC14.65□□□□□ -0.06
RETP07949 AC138466.5-201ENST00000624002 808 ntBASIC14.65□□□□□ -0.06
RETP07949 AC005618.3-201ENST00000624928 458 ntBASIC14.65□□□□□ -0.06
RETP07949 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RETP07949 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RETP07949 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RETP07949 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
RETP07949 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.65□□□□□ -0.06
RETP07949 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RETP07949 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
RETP07949 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.65□□□□□ -0.06
RETP07949 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
RETP07949 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RETP07949 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.65□□□□□ -0.06
RETP07949 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RETP07949 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
RETP07949 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RETP07949 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RETP07949 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.65□□□□□ -0.06
RETP07949 AC015909.3-201ENST00000572855 1794 ntBASIC14.65□□□□□ -0.06
RETP07949 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RETP07949 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RETP07949 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.65□□□□□ -0.06
RETP07949 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.65□□□□□ -0.06
RETP07949 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
RETP07949 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.65□□□□□ -0.06
RETP07949 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.07
RETP07949 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.65□□□□□ -0.07
RETP07949 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RETP07949 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RETP07949 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.64□□□□□ -0.07
RETP07949 RAN-210ENST00000541630 1475 ntTSL 2 BASIC14.64□□□□□ -0.07
RETP07949 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RETP07949 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.64□□□□□ -0.07
RETP07949 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
RETP07949 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
RETP07949 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RETP07949 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
RETP07949 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RETP07949 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
RETP07949 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
RETP07949 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
RETP07949 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
RETP07949 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
RETP07949 AC020910.5-201ENST00000623668 1865 ntBASIC14.64□□□□□ -0.07
RETP07949 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RETP07949 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RETP07949 BANF1P3-201ENST00000412556 261 ntBASIC14.64□□□□□ -0.07
RETP07949 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC14.64□□□□□ -0.07
RETP07949 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC14.64□□□□□ -0.07
RETP07949 HCG27-204ENST00000424675 895 ntTSL 3 BASIC14.64□□□□□ -0.07
RETP07949 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC14.64□□□□□ -0.07
RETP07949 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC14.64□□□□□ -0.07
RETP07949 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.64□□□□□ -0.07
RETP07949 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RETP07949 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC14.64□□□□□ -0.07
RETP07949 POLD4-208ENST00000532830 904 ntTSL 3 BASIC14.64□□□□□ -0.07
RETP07949 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC14.64□□□□□ -0.07
RETP07949 MIR5196-201ENST00000578146 115 ntBASIC14.64□□□□□ -0.07
RETP07949 MIR3188-201ENST00000583494 85 ntBASIC14.64□□□□□ -0.07
RETP07949 AC007326.1-201ENST00000604539 458 ntBASIC14.64□□□□□ -0.07
RETP07949 AC244250.3-201ENST00000620749 366 ntBASIC14.64□□□□□ -0.07
RETP07949 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
RETP07949 AP001184.1-201ENST00000637936 376 ntBASIC14.64□□□□□ -0.07
RETP07949 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RETP07949 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
RETP07949 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
RETP07949 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.64□□□□□ -0.07
RETP07949 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
RETP07949 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RETP07949 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
RETP07949 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
RETP07949 AL360270.3-201ENST00000609118 1348 ntBASIC14.64□□□□□ -0.07
RETP07949 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RETP07949 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC14.63□□□□□ -0.07
RETP07949 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms