Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
USH2AO75445 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
USH2AO75445 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
USH2AO75445 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
USH2AO75445 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
USH2AO75445 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
USH2AO75445 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
USH2AO75445 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC6.25□□□□□ -1.41
USH2AO75445 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC6.25□□□□□ -1.41
USH2AO75445 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC6.25□□□□□ -1.41
USH2AO75445 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
USH2AO75445 SRSF9P1-201ENST00000399149 530 ntBASIC6.25□□□□□ -1.41
USH2AO75445 TRAPPC4-202ENST00000434101 794 ntTSL 2 BASIC6.25□□□□□ -1.41
USH2AO75445 ECSIT-211ENST00000592312 1286 ntTSL 5 BASIC6.25□□□□□ -1.41
USH2AO75445 Metazoa_SRP.168-201ENST00000621608 264 ntBASIC6.25□□□□□ -1.41
USH2AO75445 AC006511.4-201ENST00000631571 561 ntTSL 3 BASIC6.25□□□□□ -1.41
USH2AO75445 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
USH2AO75445 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
USH2AO75445 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC6.25□□□□□ -1.41
USH2AO75445 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
USH2AO75445 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
USH2AO75445 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
USH2AO75445 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
USH2AO75445 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
USH2AO75445 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
USH2AO75445 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
USH2AO75445 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC6.25□□□□□ -1.41
USH2AO75445 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
USH2AO75445 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC6.25□□□□□ -1.41
USH2AO75445 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
USH2AO75445 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
USH2AO75445 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
USH2AO75445 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
USH2AO75445 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC6.25□□□□□ -1.41
USH2AO75445 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC6.25□□□□□ -1.41
USH2AO75445 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
USH2AO75445 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC6.25□□□□□ -1.41
USH2AO75445 NR2C2AP-201ENST00000331552 1293 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
USH2AO75445 NR2C2AP-202ENST00000420605 859 ntTSL 2 BASIC6.25□□□□□ -1.41
USH2AO75445 GRPEL2P1-201ENST00000453145 339 ntBASIC6.25□□□□□ -1.41
USH2AO75445 RPL3P9-201ENST00000463217 1183 ntBASIC6.25□□□□□ -1.41
USH2AO75445 MYLK-AS1-203ENST00000485162 587 ntTSL 4 BASIC6.25□□□□□ -1.41
USH2AO75445 GOLGA2-210ENST00000490628 428 ntTSL 2 BASIC6.25□□□□□ -1.41
USH2AO75445 SPATA8-202ENST00000558553 406 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
USH2AO75445 EPM2A-214ENST00000638783 801 ntTSL 5 BASIC6.25□□□□□ -1.41
USH2AO75445 EPM2A-229ENST00000640980 647 ntTSL 3 BASIC6.25□□□□□ -1.41
USH2AO75445 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC6.25□□□□□ -1.41
USH2AO75445 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
USH2AO75445 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC6.25□□□□□ -1.41
USH2AO75445 OR2C1-201ENST00000304936 1406 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
USH2AO75445 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
USH2AO75445 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC6.25□□□□□ -1.41
USH2AO75445 RBM4-202ENST00000396053 1337 ntTSL 2 BASIC6.25□□□□□ -1.41
USH2AO75445 AC064801.2-201ENST00000625052 1303 ntBASIC6.25□□□□□ -1.41
USH2AO75445 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
USH2AO75445 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
USH2AO75445 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
USH2AO75445 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
USH2AO75445 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
USH2AO75445 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
USH2AO75445 ZMAT5-201ENST00000344318 899 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
USH2AO75445 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
USH2AO75445 BX679664.3-201ENST00000414070 555 ntBASIC6.24□□□□□ -1.41
USH2AO75445 AL121983.2-204ENST00000430592 448 ntTSL 3 BASIC6.24□□□□□ -1.41
USH2AO75445 AL390961.2-201ENST00000454991 472 ntTSL 3 BASIC6.24□□□□□ -1.41
USH2AO75445 AC113935.1-201ENST00000471722 555 ntBASIC6.24□□□□□ -1.41
USH2AO75445 RN7SL2-201ENST00000490232 300 ntBASIC6.24□□□□□ -1.41
USH2AO75445 AC090589.3-201ENST00000524412 574 ntTSL 5 BASIC6.24□□□□□ -1.41
USH2AO75445 TTC39A-AS1-201ENST00000564479 812 ntTSL 3 BASIC6.24□□□□□ -1.41
USH2AO75445 AL603832.2-201ENST00000566195 2125 ntBASIC6.24□□□□□ -1.41
USH2AO75445 RN7SL4P-201ENST00000584058 295 ntBASIC6.24□□□□□ -1.41
USH2AO75445 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
USH2AO75445 AC091736.1-201ENST00000609370 305 ntBASIC6.24□□□□□ -1.41
USH2AO75445 AL162731.1-201ENST00000613248 876 ntTSL 3 BASIC6.24□□□□□ -1.41
USH2AO75445 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC6.24□□□□□ -1.41
USH2AO75445 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
USH2AO75445 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
USH2AO75445 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
USH2AO75445 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
USH2AO75445 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
USH2AO75445 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC6.24□□□□□ -1.41
USH2AO75445 NBR2-202ENST00000460115 1344 ntTSL 2 BASIC6.24□□□□□ -1.41
USH2AO75445 RAB8A-202ENST00000586682 1315 ntTSL 2 BASIC6.24□□□□□ -1.41
USH2AO75445 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC6.24□□□□□ -1.41
USH2AO75445 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC6.24□□□□□ -1.41
USH2AO75445 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC6.24□□□□□ -1.41
USH2AO75445 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
USH2AO75445 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
USH2AO75445 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
USH2AO75445 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
USH2AO75445 TUBAP-201ENST00000425085 1352 ntBASIC6.24□□□□□ -1.41
USH2AO75445 TUBB8-207ENST00000568866 1367 ntTSL 5 BASIC6.24□□□□□ -1.41
USH2AO75445 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC6.24□□□□□ -1.41
USH2AO75445 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
USH2AO75445 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC6.24□□□□□ -1.41
USH2AO75445 TBC1D27-202ENST00000424239 1573 ntBASIC6.24□□□□□ -1.41
USH2AO75445 ABCA1-201ENST00000374733 923 ntTSL 2 BASIC6.24□□□□□ -1.41
USH2AO75445 BPIFA4P-201ENST00000375465 1203 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
USH2AO75445 ZBTB46-AS1-201ENST00000435912 533 ntTSL 3 BASIC6.24□□□□□ -1.41
USH2AO75445 HNRNPA3P12-201ENST00000437410 1063 ntBASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms