Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
HLA-DRB4X5D2U9 ANKRD30BP2-201ENST00000435744 1610 ntBASIC11.05□□□□□ -0.64
HLA-DRB4X5D2U9 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
HLA-DRB4X5D2U9 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
HLA-DRB4X5D2U9 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
HLA-DRB4X5D2U9 MRPL37P1-201ENST00000592451 1337 ntBASIC11.05□□□□□ -0.64
HLA-DRB4X5D2U9 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
HLA-DRB4X5D2U9 MX1-218ENST00000619682 1980 ntTSL 5 BASIC11.05□□□□□ -0.64
HLA-DRB4X5D2U9 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
HLA-DRB4X5D2U9 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC11.05□□□□□ -0.64
HLA-DRB4X5D2U9 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
HLA-DRB4X5D2U9 AC015818.8-201ENST00000587907 1519 ntBASIC11.04□□□□□ -0.64
HLA-DRB4X5D2U9 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC11.04□□□□□ -0.64
HLA-DRB4X5D2U9 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
HLA-DRB4X5D2U9 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
HLA-DRB4X5D2U9 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
HLA-DRB4X5D2U9 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
HLA-DRB4X5D2U9 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
HLA-DRB4X5D2U9 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
HLA-DRB4X5D2U9 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
HLA-DRB4X5D2U9 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
HLA-DRB4X5D2U9 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
HLA-DRB4X5D2U9 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
HLA-DRB4X5D2U9 AC089987.1-201ENST00000551654 2209 ntBASIC11.04□□□□□ -0.64
HLA-DRB4X5D2U9 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC11.04□□□□□ -0.64
HLA-DRB4X5D2U9 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
HLA-DRB4X5D2U9 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
HLA-DRB4X5D2U9 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC11.04□□□□□ -0.64
HLA-DRB4X5D2U9 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC11.04□□□□□ -0.64
HLA-DRB4X5D2U9 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
HLA-DRB4X5D2U9 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
HLA-DRB4X5D2U9 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
HLA-DRB4X5D2U9 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC11.04□□□□□ -0.64
HLA-DRB4X5D2U9 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
HLA-DRB4X5D2U9 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
HLA-DRB4X5D2U9 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
HLA-DRB4X5D2U9 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
HLA-DRB4X5D2U9 LBX2-201ENST00000341396 886 ntTSL 3 BASIC11.04□□□□□ -0.64
HLA-DRB4X5D2U9 BOLA2P3-201ENST00000404566 256 ntBASIC11.04□□□□□ -0.64
HLA-DRB4X5D2U9 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC11.04□□□□□ -0.64
HLA-DRB4X5D2U9 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
HLA-DRB4X5D2U9 AL590640.2-201ENST00000457038 527 ntBASIC11.04□□□□□ -0.64
HLA-DRB4X5D2U9 AC007551.1-201ENST00000457394 519 ntBASIC11.04□□□□□ -0.64
HLA-DRB4X5D2U9 RPL8-205ENST00000527914 551 ntTSL 3 BASIC11.04□□□□□ -0.64
HLA-DRB4X5D2U9 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC11.04□□□□□ -0.64
HLA-DRB4X5D2U9 AC106820.3-201ENST00000561653 397 ntBASIC11.04□□□□□ -0.64
HLA-DRB4X5D2U9 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC11.04□□□□□ -0.64
HLA-DRB4X5D2U9 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC11.04□□□□□ -0.64
HLA-DRB4X5D2U9 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC11.04□□□□□ -0.64
HLA-DRB4X5D2U9 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC11.04□□□□□ -0.64
HLA-DRB4X5D2U9 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
HLA-DRB4X5D2U9 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC11.04□□□□□ -0.64
HLA-DRB4X5D2U9 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
HLA-DRB4X5D2U9 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC11.04□□□□□ -0.64
HLA-DRB4X5D2U9 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
HLA-DRB4X5D2U9 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC11.04□□□□□ -0.64
HLA-DRB4X5D2U9 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC11.04□□□□□ -0.64
HLA-DRB4X5D2U9 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
HLA-DRB4X5D2U9 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
HLA-DRB4X5D2U9 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC11.04□□□□□ -0.64
HLA-DRB4X5D2U9 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
HLA-DRB4X5D2U9 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC11.04□□□□□ -0.64
HLA-DRB4X5D2U9 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
HLA-DRB4X5D2U9 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
HLA-DRB4X5D2U9 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
HLA-DRB4X5D2U9 USP4-203ENST00000415188 1454 ntTSL 3 BASIC11.04□□□□□ -0.64
HLA-DRB4X5D2U9 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC11.04□□□□□ -0.64
HLA-DRB4X5D2U9 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
HLA-DRB4X5D2U9 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
HLA-DRB4X5D2U9 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
HLA-DRB4X5D2U9 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC11.04□□□□□ -0.64
HLA-DRB4X5D2U9 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
HLA-DRB4X5D2U9 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
HLA-DRB4X5D2U9 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC11.04□□□□□ -0.64
HLA-DRB4X5D2U9 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
HLA-DRB4X5D2U9 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
HLA-DRB4X5D2U9 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC11.04□□□□□ -0.64
HLA-DRB4X5D2U9 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC11.04□□□□□ -0.64
HLA-DRB4X5D2U9 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
HLA-DRB4X5D2U9 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC11.04□□□□□ -0.64
HLA-DRB4X5D2U9 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
HLA-DRB4X5D2U9 AL354989.2-201ENST00000435838 1540 ntBASIC11.04□□□□□ -0.64
HLA-DRB4X5D2U9 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
HLA-DRB4X5D2U9 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
HLA-DRB4X5D2U9 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC11.04□□□□□ -0.64
HLA-DRB4X5D2U9 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
HLA-DRB4X5D2U9 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC11.04□□□□□ -0.64
HLA-DRB4X5D2U9 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC11.04□□□□□ -0.64
HLA-DRB4X5D2U9 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
HLA-DRB4X5D2U9 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
HLA-DRB4X5D2U9 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC11.03□□□□□ -0.64
HLA-DRB4X5D2U9 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
HLA-DRB4X5D2U9 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC11.03□□□□□ -0.64
HLA-DRB4X5D2U9 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC11.03□□□□□ -0.64
HLA-DRB4X5D2U9 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC11.03□□□□□ -0.64
HLA-DRB4X5D2U9 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
HLA-DRB4X5D2U9 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
HLA-DRB4X5D2U9 AC015802.1-201ENST00000588104 1449 ntBASIC11.03□□□□□ -0.64
HLA-DRB4X5D2U9 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
HLA-DRB4X5D2U9 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms