Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCDHB1Q9Y5F3 GOLGA8VP-201ENST00000559009 1798 ntBASIC14.57□□□□□ -0.08
PCDHB1Q9Y5F3 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCDHB1Q9Y5F3 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCDHB1Q9Y5F3 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC14.57□□□□□ -0.08
PCDHB1Q9Y5F3 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCDHB1Q9Y5F3 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCDHB1Q9Y5F3 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHB1Q9Y5F3 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHB1Q9Y5F3 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHB1Q9Y5F3 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHB1Q9Y5F3 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHB1Q9Y5F3 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.56□□□□□ -0.08
PCDHB1Q9Y5F3 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
PCDHB1Q9Y5F3 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHB1Q9Y5F3 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
PCDHB1Q9Y5F3 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHB1Q9Y5F3 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHB1Q9Y5F3 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.56□□□□□ -0.08
PCDHB1Q9Y5F3 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.56□□□□□ -0.08
PCDHB1Q9Y5F3 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHB1Q9Y5F3 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHB1Q9Y5F3 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
PCDHB1Q9Y5F3 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC14.56□□□□□ -0.08
PCDHB1Q9Y5F3 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHB1Q9Y5F3 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHB1Q9Y5F3 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHB1Q9Y5F3 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHB1Q9Y5F3 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHB1Q9Y5F3 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHB1Q9Y5F3 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
PCDHB1Q9Y5F3 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC14.56□□□□□ -0.08
PCDHB1Q9Y5F3 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC14.56□□□□□ -0.08
PCDHB1Q9Y5F3 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHB1Q9Y5F3 AC005740.2-201ENST00000511085 419 ntBASIC14.56□□□□□ -0.08
PCDHB1Q9Y5F3 AC022217.1-201ENST00000521069 738 ntBASIC14.56□□□□□ -0.08
PCDHB1Q9Y5F3 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC14.56□□□□□ -0.08
PCDHB1Q9Y5F3 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC14.56□□□□□ -0.08
PCDHB1Q9Y5F3 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC14.56□□□□□ -0.08
PCDHB1Q9Y5F3 MIR3907-201ENST00000579424 151 ntBASIC14.56□□□□□ -0.08
PCDHB1Q9Y5F3 AL358472.3-201ENST00000608147 415 ntBASIC14.56□□□□□ -0.08
PCDHB1Q9Y5F3 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC14.56□□□□□ -0.08
PCDHB1Q9Y5F3 AC027601.3-201ENST00000622907 509 ntBASIC14.56□□□□□ -0.08
PCDHB1Q9Y5F3 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHB1Q9Y5F3 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
PCDHB1Q9Y5F3 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.56□□□□□ -0.08
PCDHB1Q9Y5F3 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
PCDHB1Q9Y5F3 ADK-205ENST00000539909 1866 ntTSL 2 BASIC14.56□□□□□ -0.08
PCDHB1Q9Y5F3 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHB1Q9Y5F3 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
PCDHB1Q9Y5F3 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.56□□□□□ -0.08
PCDHB1Q9Y5F3 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHB1Q9Y5F3 SNX18-202ENST00000343017 3140 ntBASIC14.56□□□□□ -0.08
PCDHB1Q9Y5F3 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC14.56□□□□□ -0.08
PCDHB1Q9Y5F3 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC14.56□□□□□ -0.08
PCDHB1Q9Y5F3 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.56□□□□□ -0.08
PCDHB1Q9Y5F3 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.56□□□□□ -0.08
PCDHB1Q9Y5F3 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC14.56□□□□□ -0.08
PCDHB1Q9Y5F3 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC14.56□□□□□ -0.08
PCDHB1Q9Y5F3 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.56□□□□□ -0.08
PCDHB1Q9Y5F3 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHB1Q9Y5F3 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC14.56□□□□□ -0.08
PCDHB1Q9Y5F3 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHB1Q9Y5F3 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHB1Q9Y5F3 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.55□□□□□ -0.08
PCDHB1Q9Y5F3 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHB1Q9Y5F3 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHB1Q9Y5F3 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.55□□□□□ -0.08
PCDHB1Q9Y5F3 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHB1Q9Y5F3 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.55□□□□□ -0.08
PCDHB1Q9Y5F3 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHB1Q9Y5F3 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.55□□□□□ -0.08
PCDHB1Q9Y5F3 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC14.55□□□□□ -0.08
PCDHB1Q9Y5F3 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHB1Q9Y5F3 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHB1Q9Y5F3 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
PCDHB1Q9Y5F3 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC14.55□□□□□ -0.08
PCDHB1Q9Y5F3 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC14.55□□□□□ -0.08
PCDHB1Q9Y5F3 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHB1Q9Y5F3 AC010141.1-201ENST00000411585 623 ntBASIC14.55□□□□□ -0.08
PCDHB1Q9Y5F3 ACTG1P2-201ENST00000415776 1125 ntBASIC14.55□□□□□ -0.08
PCDHB1Q9Y5F3 ACTG1P11-201ENST00000425411 1125 ntBASIC14.55□□□□□ -0.08
PCDHB1Q9Y5F3 CHMP1AP1-201ENST00000445563 662 ntBASIC14.55□□□□□ -0.08
PCDHB1Q9Y5F3 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC14.55□□□□□ -0.08
PCDHB1Q9Y5F3 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC14.55□□□□□ -0.08
PCDHB1Q9Y5F3 AC100850.1-201ENST00000506768 649 ntBASIC14.55□□□□□ -0.08
PCDHB1Q9Y5F3 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHB1Q9Y5F3 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC14.55□□□□□ -0.08
PCDHB1Q9Y5F3 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC14.55□□□□□ -0.08
PCDHB1Q9Y5F3 AC027237.1-201ENST00000560942 655 ntBASIC14.55□□□□□ -0.08
PCDHB1Q9Y5F3 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHB1Q9Y5F3 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHB1Q9Y5F3 RN7SL574P-201ENST00000581512 297 ntBASIC14.55□□□□□ -0.08
PCDHB1Q9Y5F3 AL645939.5-201ENST00000606834 243 ntBASIC14.55□□□□□ -0.08
PCDHB1Q9Y5F3 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC14.55□□□□□ -0.08
PCDHB1Q9Y5F3 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC14.55□□□□□ -0.08
PCDHB1Q9Y5F3 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHB1Q9Y5F3 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.55□□□□□ -0.08
PCDHB1Q9Y5F3 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC14.55□□□□□ -0.08
PCDHB1Q9Y5F3 AC008132.1-202ENST00000342005 1389 ntBASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms