Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC12.25□□□□□ -0.45
KCNIP3Q9Y2W7 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
KCNIP3Q9Y2W7 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC12.25□□□□□ -0.45
KCNIP3Q9Y2W7 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
KCNIP3Q9Y2W7 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
KCNIP3Q9Y2W7 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC12.25□□□□□ -0.45
KCNIP3Q9Y2W7 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC12.25□□□□□ -0.45
KCNIP3Q9Y2W7 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
KCNIP3Q9Y2W7 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
KCNIP3Q9Y2W7 POU5F2-201ENST00000606183 8418 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
KCNIP3Q9Y2W7 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
KCNIP3Q9Y2W7 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
KCNIP3Q9Y2W7 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
KCNIP3Q9Y2W7 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC12.25□□□□□ -0.45
KCNIP3Q9Y2W7 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
KCNIP3Q9Y2W7 IMP4-203ENST00000409935 958 ntTSL 5 BASIC12.25□□□□□ -0.45
KCNIP3Q9Y2W7 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
KCNIP3Q9Y2W7 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC12.25□□□□□ -0.45
KCNIP3Q9Y2W7 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC12.25□□□□□ -0.45
KCNIP3Q9Y2W7 HLA-V-204ENST00000476601 1289 ntBASIC12.25□□□□□ -0.45
KCNIP3Q9Y2W7 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
KCNIP3Q9Y2W7 PUS1-205ENST00000535067 838 ntTSL 3 BASIC12.25□□□□□ -0.45
KCNIP3Q9Y2W7 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC12.25□□□□□ -0.45
KCNIP3Q9Y2W7 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC12.25□□□□□ -0.45
KCNIP3Q9Y2W7 AC005829.1-201ENST00000570002 483 ntBASIC12.25□□□□□ -0.45
KCNIP3Q9Y2W7 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC12.25□□□□□ -0.45
KCNIP3Q9Y2W7 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC12.25□□□□□ -0.45
KCNIP3Q9Y2W7 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
KCNIP3Q9Y2W7 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
KCNIP3Q9Y2W7 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC12.25□□□□□ -0.45
KCNIP3Q9Y2W7 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
KCNIP3Q9Y2W7 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC12.25□□□□□ -0.45
KCNIP3Q9Y2W7 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC12.25□□□□□ -0.45
KCNIP3Q9Y2W7 MRPL37P1-201ENST00000592451 1337 ntBASIC12.25□□□□□ -0.45
KCNIP3Q9Y2W7 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
KCNIP3Q9Y2W7 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
KCNIP3Q9Y2W7 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC12.25□□□□□ -0.45
KCNIP3Q9Y2W7 INF2-202ENST00000330634 7578 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
KCNIP3Q9Y2W7 INHBA-201ENST00000242208 6064 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
KCNIP3Q9Y2W7 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
KCNIP3Q9Y2W7 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
KCNIP3Q9Y2W7 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
KCNIP3Q9Y2W7 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
KCNIP3Q9Y2W7 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC12.25□□□□□ -0.45
KCNIP3Q9Y2W7 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
KCNIP3Q9Y2W7 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
KCNIP3Q9Y2W7 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
KCNIP3Q9Y2W7 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
KCNIP3Q9Y2W7 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
KCNIP3Q9Y2W7 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
KCNIP3Q9Y2W7 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
KCNIP3Q9Y2W7 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
KCNIP3Q9Y2W7 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
KCNIP3Q9Y2W7 AC011498.7-201ENST00000624986 2027 ntBASIC12.25□□□□□ -0.45
KCNIP3Q9Y2W7 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
KCNIP3Q9Y2W7 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
KCNIP3Q9Y2W7 PRICKLE1-203ENST00000455697 4277 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
KCNIP3Q9Y2W7 USP20-201ENST00000315480 4458 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
KCNIP3Q9Y2W7 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
KCNIP3Q9Y2W7 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
KCNIP3Q9Y2W7 INVS-201ENST00000262456 2968 ntTSL 5 BASIC12.24□□□□□ -0.45
KCNIP3Q9Y2W7 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
KCNIP3Q9Y2W7 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
KCNIP3Q9Y2W7 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC12.24□□□□□ -0.45
KCNIP3Q9Y2W7 ZNF236-202ENST00000320610 7124 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
KCNIP3Q9Y2W7 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
KCNIP3Q9Y2W7 NCBP1-202ENST00000375147 5178 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
KCNIP3Q9Y2W7 MRVI1-201ENST00000423302 6126 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
KCNIP3Q9Y2W7 GFRA1-204ENST00000439649 9216 ntAPPRIS P3 TSL 2 BASIC12.24□□□□□ -0.45
KCNIP3Q9Y2W7 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
KCNIP3Q9Y2W7 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC12.24□□□□□ -0.45
KCNIP3Q9Y2W7 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
KCNIP3Q9Y2W7 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
KCNIP3Q9Y2W7 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
KCNIP3Q9Y2W7 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
KCNIP3Q9Y2W7 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
KCNIP3Q9Y2W7 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC12.24□□□□□ -0.45
KCNIP3Q9Y2W7 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
KCNIP3Q9Y2W7 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
KCNIP3Q9Y2W7 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
KCNIP3Q9Y2W7 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
KCNIP3Q9Y2W7 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC12.24□□□□□ -0.45
KCNIP3Q9Y2W7 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC12.24□□□□□ -0.45
KCNIP3Q9Y2W7 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
KCNIP3Q9Y2W7 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC12.24□□□□□ -0.45
KCNIP3Q9Y2W7 AC004461.1-201ENST00000412461 403 ntBASIC12.24□□□□□ -0.45
KCNIP3Q9Y2W7 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC12.24□□□□□ -0.45
KCNIP3Q9Y2W7 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
KCNIP3Q9Y2W7 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC12.24□□□□□ -0.45
KCNIP3Q9Y2W7 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC12.24□□□□□ -0.45
KCNIP3Q9Y2W7 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
KCNIP3Q9Y2W7 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
KCNIP3Q9Y2W7 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
KCNIP3Q9Y2W7 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC12.24□□□□□ -0.45
KCNIP3Q9Y2W7 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC12.24□□□□□ -0.45
KCNIP3Q9Y2W7 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC12.24□□□□□ -0.45
KCNIP3Q9Y2W7 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC12.24□□□□□ -0.45
KCNIP3Q9Y2W7 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC12.24□□□□□ -0.45
KCNIP3Q9Y2W7 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC12.24□□□□□ -0.45
KCNIP3Q9Y2W7 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC12.24□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms