Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.56□□□□□ -0.08
SPASTQ9UBP0 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SPASTQ9UBP0 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.55□□□□□ -0.08
SPASTQ9UBP0 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.55□□□□□ -0.08
SPASTQ9UBP0 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.55□□□□□ -0.08
SPASTQ9UBP0 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SPASTQ9UBP0 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
SPASTQ9UBP0 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
SPASTQ9UBP0 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.55□□□□□ -0.08
SPASTQ9UBP0 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SPASTQ9UBP0 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.55□□□□□ -0.08
SPASTQ9UBP0 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.55□□□□□ -0.08
SPASTQ9UBP0 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SPASTQ9UBP0 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SPASTQ9UBP0 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SPASTQ9UBP0 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
SPASTQ9UBP0 SLC16A6P1-201ENST00000413214 1059 ntBASIC14.55□□□□□ -0.08
SPASTQ9UBP0 HLA-DPB2-205ENST00000435074 1188 ntBASIC14.55□□□□□ -0.08
SPASTQ9UBP0 SKA2-202ENST00000437036 625 ntTSL 2 BASIC14.55□□□□□ -0.08
SPASTQ9UBP0 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC14.55□□□□□ -0.08
SPASTQ9UBP0 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC14.55□□□□□ -0.08
SPASTQ9UBP0 RN7SL720P-201ENST00000488178 304 ntBASIC14.55□□□□□ -0.08
SPASTQ9UBP0 AC125604.1-201ENST00000496255 707 ntBASIC14.55□□□□□ -0.08
SPASTQ9UBP0 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC14.55□□□□□ -0.08
SPASTQ9UBP0 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC14.55□□□□□ -0.08
SPASTQ9UBP0 AC105129.2-201ENST00000559536 390 ntBASIC14.55□□□□□ -0.08
SPASTQ9UBP0 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC14.55□□□□□ -0.08
SPASTQ9UBP0 COG4-212ENST00000564653 590 ntTSL 5 BASIC14.55□□□□□ -0.08
SPASTQ9UBP0 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SPASTQ9UBP0 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
SPASTQ9UBP0 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SPASTQ9UBP0 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SPASTQ9UBP0 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
SPASTQ9UBP0 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.55□□□□□ -0.08
SPASTQ9UBP0 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
SPASTQ9UBP0 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SPASTQ9UBP0 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC14.55□□□□□ -0.08
SPASTQ9UBP0 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC14.55□□□□□ -0.08
SPASTQ9UBP0 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
SPASTQ9UBP0 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SPASTQ9UBP0 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
SPASTQ9UBP0 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SPASTQ9UBP0 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.54□□□□□ -0.08
SPASTQ9UBP0 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SPASTQ9UBP0 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
SPASTQ9UBP0 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SPASTQ9UBP0 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.54□□□□□ -0.08
SPASTQ9UBP0 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.54□□□□□ -0.08
SPASTQ9UBP0 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SPASTQ9UBP0 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SPASTQ9UBP0 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
SPASTQ9UBP0 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SPASTQ9UBP0 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC14.54□□□□□ -0.08
SPASTQ9UBP0 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC14.54□□□□□ -0.08
SPASTQ9UBP0 MSRA-203ENST00000441698 788 ntTSL 2 BASIC14.54□□□□□ -0.08
SPASTQ9UBP0 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC14.54□□□□□ -0.08
SPASTQ9UBP0 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SPASTQ9UBP0 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC14.54□□□□□ -0.08
SPASTQ9UBP0 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
SPASTQ9UBP0 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC14.54□□□□□ -0.08
SPASTQ9UBP0 CHMP4BP1-201ENST00000556017 588 ntBASIC14.54□□□□□ -0.08
SPASTQ9UBP0 AC079328.1-201ENST00000560358 952 ntBASIC14.54□□□□□ -0.08
SPASTQ9UBP0 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC14.54□□□□□ -0.08
SPASTQ9UBP0 AC008805.1-201ENST00000590892 364 ntBASIC14.54□□□□□ -0.08
SPASTQ9UBP0 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
SPASTQ9UBP0 HCG18-245ENST00000602550 559 ntTSL 4 BASIC14.54□□□□□ -0.08
SPASTQ9UBP0 AC097724.1-201ENST00000609581 426 ntBASIC14.54□□□□□ -0.08
SPASTQ9UBP0 AP000346.4-201ENST00000614827 381 ntBASIC14.54□□□□□ -0.08
SPASTQ9UBP0 AL008718.2-201ENST00000609206 1313 ntBASIC14.54□□□□□ -0.08
SPASTQ9UBP0 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SPASTQ9UBP0 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SPASTQ9UBP0 AC131212.3-201ENST00000624087 4219 ntBASIC14.54□□□□□ -0.08
SPASTQ9UBP0 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
SPASTQ9UBP0 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC14.54□□□□□ -0.08
SPASTQ9UBP0 AL157791.1-201ENST00000553667 1699 ntBASIC14.54□□□□□ -0.08
SPASTQ9UBP0 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC14.54□□□□□ -0.08
SPASTQ9UBP0 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SPASTQ9UBP0 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SPASTQ9UBP0 AC023090.2-201ENST00000625182 2110 ntBASIC14.54□□□□□ -0.08
SPASTQ9UBP0 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
SPASTQ9UBP0 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SPASTQ9UBP0 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SPASTQ9UBP0 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SPASTQ9UBP0 AC005912.2-201ENST00000619492 2400 ntBASIC14.54□□□□□ -0.08
SPASTQ9UBP0 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.54□□□□□ -0.08
SPASTQ9UBP0 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.54□□□□□ -0.08
SPASTQ9UBP0 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
SPASTQ9UBP0 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.54□□□□□ -0.08
SPASTQ9UBP0 AC104581.4-201ENST00000623126 3052 ntBASIC14.54□□□□□ -0.08
SPASTQ9UBP0 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
SPASTQ9UBP0 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SPASTQ9UBP0 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.54□□□□□ -0.08
SPASTQ9UBP0 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
SPASTQ9UBP0 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
SPASTQ9UBP0 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
SPASTQ9UBP0 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SPASTQ9UBP0 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.53□□□□□ -0.08
SPASTQ9UBP0 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.53□□□□□ -0.08
SPASTQ9UBP0 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SPASTQ9UBP0 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms