Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
SLC52A1Q9NWF4 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC52A1Q9NWF4 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC52A1Q9NWF4 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC52A1Q9NWF4 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC52A1Q9NWF4 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC52A1Q9NWF4 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
SLC52A1Q9NWF4 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SLC52A1Q9NWF4 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
SLC52A1Q9NWF4 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
SLC52A1Q9NWF4 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC20.31■□□□□ 0.84
SLC52A1Q9NWF4 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC20.31■□□□□ 0.84
SLC52A1Q9NWF4 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SLC52A1Q9NWF4 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC52A1Q9NWF4 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
SLC52A1Q9NWF4 AC022080.1-201ENST00000366255 781 ntBASIC20.31■□□□□ 0.84
SLC52A1Q9NWF4 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC20.31■□□□□ 0.84
SLC52A1Q9NWF4 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SLC52A1Q9NWF4 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC20.31■□□□□ 0.84
SLC52A1Q9NWF4 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC20.31■□□□□ 0.84
SLC52A1Q9NWF4 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
SLC52A1Q9NWF4 HNRNPA1P2-207ENST00000432375 960 ntBASIC20.31■□□□□ 0.84
SLC52A1Q9NWF4 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC20.31■□□□□ 0.84
SLC52A1Q9NWF4 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC52A1Q9NWF4 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC20.31■□□□□ 0.84
SLC52A1Q9NWF4 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC20.31■□□□□ 0.84
SLC52A1Q9NWF4 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SLC52A1Q9NWF4 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC52A1Q9NWF4 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC52A1Q9NWF4 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC52A1Q9NWF4 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC52A1Q9NWF4 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC52A1Q9NWF4 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC20.3■□□□□ 0.84
SLC52A1Q9NWF4 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SLC52A1Q9NWF4 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC52A1Q9NWF4 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC20.3■□□□□ 0.84
SLC52A1Q9NWF4 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SLC52A1Q9NWF4 AC013268.4-201ENST00000637413 2228 ntBASIC20.3■□□□□ 0.84
SLC52A1Q9NWF4 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
SLC52A1Q9NWF4 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC52A1Q9NWF4 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC52A1Q9NWF4 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SLC52A1Q9NWF4 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SLC52A1Q9NWF4 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
SLC52A1Q9NWF4 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SLC52A1Q9NWF4 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
SLC52A1Q9NWF4 OR10N1P-201ENST00000392758 869 ntBASIC20.3■□□□□ 0.84
SLC52A1Q9NWF4 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC20.3■□□□□ 0.84
SLC52A1Q9NWF4 NALT1-202ENST00000450304 437 ntTSL 3 BASIC20.3■□□□□ 0.84
SLC52A1Q9NWF4 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC20.3■□□□□ 0.84
SLC52A1Q9NWF4 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
SLC52A1Q9NWF4 AC092903.1-201ENST00000466506 262 ntBASIC20.3■□□□□ 0.84
SLC52A1Q9NWF4 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC20.3■□□□□ 0.84
SLC52A1Q9NWF4 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC20.3■□□□□ 0.84
SLC52A1Q9NWF4 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC52A1Q9NWF4 AC022447.6-201ENST00000515522 438 ntBASIC20.3■□□□□ 0.84
SLC52A1Q9NWF4 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC52A1Q9NWF4 BAK1P2-201ENST00000532665 631 ntBASIC20.3■□□□□ 0.84
SLC52A1Q9NWF4 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC20.3■□□□□ 0.84
SLC52A1Q9NWF4 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC20.3■□□□□ 0.84
SLC52A1Q9NWF4 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
SLC52A1Q9NWF4 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
SLC52A1Q9NWF4 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC20.3■□□□□ 0.84
SLC52A1Q9NWF4 AL031673.1-201ENST00000611460 466 ntBASIC20.3■□□□□ 0.84
SLC52A1Q9NWF4 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC20.3■□□□□ 0.84
SLC52A1Q9NWF4 RARS-210ENST00000626454 177 ntTSL 5 BASIC20.3■□□□□ 0.84
SLC52A1Q9NWF4 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
SLC52A1Q9NWF4 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC52A1Q9NWF4 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC52A1Q9NWF4 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC52A1Q9NWF4 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SLC52A1Q9NWF4 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
SLC52A1Q9NWF4 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC52A1Q9NWF4 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC20.3■□□□□ 0.84
SLC52A1Q9NWF4 USP39-220ENST00000613444 2161 ntTSL 2 BASIC20.29■□□□□ 0.84
SLC52A1Q9NWF4 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
SLC52A1Q9NWF4 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC52A1Q9NWF4 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC52A1Q9NWF4 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC52A1Q9NWF4 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SLC52A1Q9NWF4 HYMAI-201ENST00000635591 3347 ntBASIC20.29■□□□□ 0.84
SLC52A1Q9NWF4 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC20.29■□□□□ 0.84
SLC52A1Q9NWF4 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
SLC52A1Q9NWF4 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SLC52A1Q9NWF4 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SLC52A1Q9NWF4 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC52A1Q9NWF4 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC20.29■□□□□ 0.84
SLC52A1Q9NWF4 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC20.29■□□□□ 0.84
SLC52A1Q9NWF4 EEF1DP2-201ENST00000433698 843 ntBASIC20.29■□□□□ 0.84
SLC52A1Q9NWF4 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC20.29■□□□□ 0.84
SLC52A1Q9NWF4 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC20.29■□□□□ 0.84
SLC52A1Q9NWF4 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC20.29■□□□□ 0.84
SLC52A1Q9NWF4 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC52A1Q9NWF4 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
SLC52A1Q9NWF4 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC52A1Q9NWF4 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC52A1Q9NWF4 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
SLC52A1Q9NWF4 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
SLC52A1Q9NWF4 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC52A1Q9NWF4 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms