Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC7.2□□□□□ -1.26
CDC42SE1Q9NRR8 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
CDC42SE1Q9NRR8 CAPN9-201ENST00000271971 2362 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CDC42SE1Q9NRR8 ZNF608-210ENST00000613878 3190 ntTSL 5 BASIC7.2□□□□□ -1.26
CDC42SE1Q9NRR8 CBLB-203ENST00000403724 3350 ntTSL 2 BASIC7.2□□□□□ -1.26
CDC42SE1Q9NRR8 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CDC42SE1Q9NRR8 PPP1R8-201ENST00000236412 2414 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CDC42SE1Q9NRR8 OAS1-208ENST00000551241 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
CDC42SE1Q9NRR8 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC7.2□□□□□ -1.26
CDC42SE1Q9NRR8 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
CDC42SE1Q9NRR8 ITFG1-204ENST00000544001 1849 ntTSL 2 BASIC7.2□□□□□ -1.26
CDC42SE1Q9NRR8 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CDC42SE1Q9NRR8 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CDC42SE1Q9NRR8 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CDC42SE1Q9NRR8 ITPRIP-202ENST00000337478 4093 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CDC42SE1Q9NRR8 ANO1-207ENST00000530676 3289 ntAPPRIS ALT2 TSL 2 BASIC7.2□□□□□ -1.26
CDC42SE1Q9NRR8 PRKCQ-202ENST00000397176 3096 ntTSL 5 BASIC7.2□□□□□ -1.26
CDC42SE1Q9NRR8 FAM172A-201ENST00000395965 4312 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CDC42SE1Q9NRR8 RBM10-203ENST00000377604 3747 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
CDC42SE1Q9NRR8 C1RL-AS1-201ENST00000382215 2086 ntTSL 2 BASIC7.2□□□□□ -1.26
CDC42SE1Q9NRR8 JMJD7-PLA2G4B-202ENST00000382448 3331 ntAPPRIS P3 TSL 2 BASIC7.2□□□□□ -1.26
CDC42SE1Q9NRR8 LILRA6-203ENST00000396365 1890 ntAPPRIS P2 TSL 1 (best) BASIC7.2□□□□□ -1.26
CDC42SE1Q9NRR8 PKM-222ENST00000568883 1863 ntTSL 5 BASIC7.2□□□□□ -1.26
CDC42SE1Q9NRR8 JADE1-213ENST00000610919 5644 ntAPPRIS P3 TSL 5 BASIC7.2□□□□□ -1.26
CDC42SE1Q9NRR8 NANP-201ENST00000304788 3964 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CDC42SE1Q9NRR8 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
CDC42SE1Q9NRR8 TMC3-201ENST00000359440 4641 ntAPPRIS P2 TSL 1 (best) BASIC7.2□□□□□ -1.26
CDC42SE1Q9NRR8 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
CDC42SE1Q9NRR8 MST1R-215ENST00000621387 4449 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CDC42SE1Q9NRR8 SERPINH1-202ENST00000524558 3391 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
CDC42SE1Q9NRR8 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC7.2□□□□□ -1.26
CDC42SE1Q9NRR8 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
CDC42SE1Q9NRR8 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CDC42SE1Q9NRR8 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC7.2□□□□□ -1.26
CDC42SE1Q9NRR8 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC7.2□□□□□ -1.26
CDC42SE1Q9NRR8 BX284668.4-201ENST00000453917 508 ntBASIC7.2□□□□□ -1.26
CDC42SE1Q9NRR8 SERBP1P5-201ENST00000510079 1181 ntBASIC7.2□□□□□ -1.26
CDC42SE1Q9NRR8 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC7.2□□□□□ -1.26
CDC42SE1Q9NRR8 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CDC42SE1Q9NRR8 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC7.2□□□□□ -1.26
CDC42SE1Q9NRR8 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CDC42SE1Q9NRR8 AC006557.6-201ENST00000623071 864 ntBASIC7.2□□□□□ -1.26
CDC42SE1Q9NRR8 RASSF1-AS1-201ENST00000629828 790 ntBASIC7.2□□□□□ -1.26
CDC42SE1Q9NRR8 GRPEL1-201ENST00000264954 2775 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CDC42SE1Q9NRR8 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CDC42SE1Q9NRR8 ZC2HC1C-203ENST00000524913 4283 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
CDC42SE1Q9NRR8 MAP3K7-204ENST00000369329 4911 ntAPPRIS P4 TSL 1 (best) BASIC7.2□□□□□ -1.26
CDC42SE1Q9NRR8 MTA2-202ENST00000524902 2577 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CDC42SE1Q9NRR8 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
CDC42SE1Q9NRR8 LOXHD1-207ENST00000441551 6226 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
CDC42SE1Q9NRR8 FERMT1-204ENST00000536936 3229 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CDC42SE1Q9NRR8 MAGEB16-202ENST00000399987 1736 ntAPPRIS P2 TSL 5 BASIC7.2□□□□□ -1.26
CDC42SE1Q9NRR8 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC7.2□□□□□ -1.26
CDC42SE1Q9NRR8 TAF1C-201ENST00000341690 3678 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
CDC42SE1Q9NRR8 SAMHD1-201ENST00000262878 4784 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CDC42SE1Q9NRR8 VRTN-201ENST00000256362 3466 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CDC42SE1Q9NRR8 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CDC42SE1Q9NRR8 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CDC42SE1Q9NRR8 GOLGA8O-201ENST00000509311 1997 ntAPPRIS P2 TSL 5 BASIC7.2□□□□□ -1.26
CDC42SE1Q9NRR8 TBC1D3P5-203ENST00000586223 3083 ntTSL 2 BASIC7.2□□□□□ -1.26
CDC42SE1Q9NRR8 AP000356.2-201ENST00000639904 4634 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CDC42SE1Q9NRR8 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC7.2□□□□□ -1.26
CDC42SE1Q9NRR8 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CDC42SE1Q9NRR8 SPAG8-201ENST00000340291 1759 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
CDC42SE1Q9NRR8 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
CDC42SE1Q9NRR8 SHMT2-205ENST00000553474 1765 ntTSL 2 BASIC7.2□□□□□ -1.26
CDC42SE1Q9NRR8 PHC2-204ENST00000431992 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
CDC42SE1Q9NRR8 MIS12-202ENST00000573759 2204 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CDC42SE1Q9NRR8 PBRM1-201ENST00000296302 5145 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CDC42SE1Q9NRR8 ELP2-202ENST00000351393 2453 ntTSL 2 BASIC7.2□□□□□ -1.26
CDC42SE1Q9NRR8 HOXA1-202ENST00000355633 2016 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CDC42SE1Q9NRR8 AC010460.3-201ENST00000511359 1579 ntBASIC7.2□□□□□ -1.26
CDC42SE1Q9NRR8 CYP1A2-201ENST00000343932 2728 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CDC42SE1Q9NRR8 AC048338.1-201ENST00000535844 2748 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
CDC42SE1Q9NRR8 SALL4-201ENST00000217086 5208 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CDC42SE1Q9NRR8 SRC-203ENST00000373567 4321 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CDC42SE1Q9NRR8 ADGRE4P-201ENST00000597372 1810 ntBASIC7.2□□□□□ -1.26
CDC42SE1Q9NRR8 ICOSLG-204ENST00000407780 7080 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
CDC42SE1Q9NRR8 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CDC42SE1Q9NRR8 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
CDC42SE1Q9NRR8 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC7.2□□□□□ -1.26
CDC42SE1Q9NRR8 AC018665.1-201ENST00000622927 1362 ntBASIC7.2□□□□□ -1.26
CDC42SE1Q9NRR8 MCCC2-201ENST00000340941 3665 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CDC42SE1Q9NRR8 HDAC6-201ENST00000334136 4190 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 ENPP2-203ENST00000427067 3271 ntTSL 5 BASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 RALBP1-202ENST00000383432 4224 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 AC098650.1-201ENST00000635992 3535 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 IL16-203ENST00000394652 2397 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 THOC5-204ENST00000397873 2374 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 APBB2-214ENST00000508593 3592 ntAPPRIS ALT1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 IKBKB-230ENST00000629753 4069 ntTSL 2 BASIC7.19□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms