Protein–RNA interactions for Protein: Q9NPB8

GPCPD1, Glycerophosphocholine phosphodiesterase GPCPD1, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1Q9NPB8 AC006435.4-201ENST00000625037 234 ntBASIC16.83■□□□□ 0.28
GPCPD1Q9NPB8 AL356737.1-201ENST00000634391 234 ntBASIC16.83■□□□□ 0.28
GPCPD1Q9NPB8 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
GPCPD1Q9NPB8 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
GPCPD1Q9NPB8 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
GPCPD1Q9NPB8 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
GPCPD1Q9NPB8 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
GPCPD1Q9NPB8 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
GPCPD1Q9NPB8 OR2I1P-209ENST00000641730 5365 ntBASIC16.83■□□□□ 0.28
GPCPD1Q9NPB8 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
GPCPD1Q9NPB8 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GPCPD1Q9NPB8 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
GPCPD1Q9NPB8 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GPCPD1Q9NPB8 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GPCPD1Q9NPB8 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
GPCPD1Q9NPB8 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC16.82■□□□□ 0.28
GPCPD1Q9NPB8 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC16.82■□□□□ 0.28
GPCPD1Q9NPB8 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC16.82■□□□□ 0.28
GPCPD1Q9NPB8 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GPCPD1Q9NPB8 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GPCPD1Q9NPB8 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC16.82■□□□□ 0.28
GPCPD1Q9NPB8 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC16.82■□□□□ 0.28
GPCPD1Q9NPB8 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC16.82■□□□□ 0.28
GPCPD1Q9NPB8 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
GPCPD1Q9NPB8 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GPCPD1Q9NPB8 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
GPCPD1Q9NPB8 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GPCPD1Q9NPB8 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GPCPD1Q9NPB8 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
GPCPD1Q9NPB8 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GPCPD1Q9NPB8 RDX-218ENST00000544551 4117 ntTSL 2 BASIC16.82■□□□□ 0.28
GPCPD1Q9NPB8 FRMPD2B-201ENST00000431305 1347 ntBASIC16.82■□□□□ 0.28
GPCPD1Q9NPB8 AC091046.1-201ENST00000331871 207 ntBASIC16.82■□□□□ 0.28
GPCPD1Q9NPB8 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GPCPD1Q9NPB8 HLA-DQB2-229ENST00000411527 1059 ntBASIC16.82■□□□□ 0.28
GPCPD1Q9NPB8 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC16.82■□□□□ 0.28
GPCPD1Q9NPB8 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC16.82■□□□□ 0.28
GPCPD1Q9NPB8 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC16.82■□□□□ 0.28
GPCPD1Q9NPB8 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC16.82■□□□□ 0.28
GPCPD1Q9NPB8 TPT1P11-201ENST00000458482 498 ntBASIC16.82■□□□□ 0.28
GPCPD1Q9NPB8 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC16.82■□□□□ 0.28
GPCPD1Q9NPB8 RNA5SP423-201ENST00000517127 109 ntBASIC16.82■□□□□ 0.28
GPCPD1Q9NPB8 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC16.82■□□□□ 0.28
GPCPD1Q9NPB8 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC16.82■□□□□ 0.28
GPCPD1Q9NPB8 DRG2-220ENST00000583355 891 ntTSL 3 BASIC16.82■□□□□ 0.28
GPCPD1Q9NPB8 CENPX-208ENST00000584347 799 ntTSL 2 BASIC16.82■□□□□ 0.28
GPCPD1Q9NPB8 AL109837.1-201ENST00000603272 613 ntBASIC16.82■□□□□ 0.28
GPCPD1Q9NPB8 AC012044.1-201ENST00000603431 297 ntBASIC16.82■□□□□ 0.28
GPCPD1Q9NPB8 AC084346.2-201ENST00000607097 949 ntBASIC16.82■□□□□ 0.28
GPCPD1Q9NPB8 AL353770.1-201ENST00000614915 403 ntBASIC16.82■□□□□ 0.28
GPCPD1Q9NPB8 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GPCPD1Q9NPB8 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GPCPD1Q9NPB8 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
GPCPD1Q9NPB8 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
GPCPD1Q9NPB8 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
GPCPD1Q9NPB8 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GPCPD1Q9NPB8 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GPCPD1Q9NPB8 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC16.82■□□□□ 0.28
GPCPD1Q9NPB8 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
GPCPD1Q9NPB8 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC16.82■□□□□ 0.28
GPCPD1Q9NPB8 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GPCPD1Q9NPB8 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GPCPD1Q9NPB8 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC16.81■□□□□ 0.28
GPCPD1Q9NPB8 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC16.81■□□□□ 0.28
GPCPD1Q9NPB8 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
GPCPD1Q9NPB8 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GPCPD1Q9NPB8 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GPCPD1Q9NPB8 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GPCPD1Q9NPB8 AC139749.1-202ENST00000617529 3139 ntBASIC16.81■□□□□ 0.28
GPCPD1Q9NPB8 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
GPCPD1Q9NPB8 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC16.81■□□□□ 0.28
GPCPD1Q9NPB8 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GPCPD1Q9NPB8 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GPCPD1Q9NPB8 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
GPCPD1Q9NPB8 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
GPCPD1Q9NPB8 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GPCPD1Q9NPB8 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GPCPD1Q9NPB8 AL390755.1-201ENST00000623716 2027 ntBASIC16.81■□□□□ 0.28
GPCPD1Q9NPB8 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC16.81■□□□□ 0.28
GPCPD1Q9NPB8 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GPCPD1Q9NPB8 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC16.81■□□□□ 0.28
GPCPD1Q9NPB8 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GPCPD1Q9NPB8 LINC00552-201ENST00000625151 2579 ntBASIC16.81■□□□□ 0.28
GPCPD1Q9NPB8 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GPCPD1Q9NPB8 RNA5SP359-201ENST00000364838 113 ntBASIC16.81■□□□□ 0.28
GPCPD1Q9NPB8 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC16.81■□□□□ 0.28
GPCPD1Q9NPB8 AC007274.2-201ENST00000421675 662 ntBASIC16.81■□□□□ 0.28
GPCPD1Q9NPB8 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GPCPD1Q9NPB8 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC16.81■□□□□ 0.28
GPCPD1Q9NPB8 AL161932.2-201ENST00000435436 679 ntBASIC16.81■□□□□ 0.28
GPCPD1Q9NPB8 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC16.81■□□□□ 0.28
GPCPD1Q9NPB8 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC16.81■□□□□ 0.28
GPCPD1Q9NPB8 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC16.81■□□□□ 0.28
GPCPD1Q9NPB8 POU5F1P2-201ENST00000521750 823 ntBASIC16.81■□□□□ 0.28
GPCPD1Q9NPB8 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GPCPD1Q9NPB8 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GPCPD1Q9NPB8 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC16.81■□□□□ 0.28
GPCPD1Q9NPB8 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC16.81■□□□□ 0.28
GPCPD1Q9NPB8 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
GPCPD1Q9NPB8 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms