Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC15.05■□□□□ -0
PCDH9Q9HC56 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC15.05■□□□□ -0
PCDH9Q9HC56 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PCDH9Q9HC56 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC15.05■□□□□ -0
PCDH9Q9HC56 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC15.05■□□□□ -0
PCDH9Q9HC56 AC026954.1-201ENST00000429771 1293 ntBASIC15.05■□□□□ -0
PCDH9Q9HC56 WBP2-203ENST00000433525 928 ntTSL 2 BASIC15.05■□□□□ -0
PCDH9Q9HC56 AC022210.1-201ENST00000449856 793 ntBASIC15.05■□□□□ -0
PCDH9Q9HC56 COX5BP1-201ENST00000507622 393 ntBASIC15.05■□□□□ -0
PCDH9Q9HC56 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC15.05■□□□□ -0
PCDH9Q9HC56 IGHV3-71-201ENST00000523324 359 ntBASIC15.05■□□□□ -0
PCDH9Q9HC56 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC15.05■□□□□ -0
PCDH9Q9HC56 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC15.05■□□□□ -0
PCDH9Q9HC56 AP003171.2-201ENST00000528208 925 ntBASIC15.05■□□□□ -0
PCDH9Q9HC56 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC15.05■□□□□ -0
PCDH9Q9HC56 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC15.05■□□□□ -0
PCDH9Q9HC56 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
PCDH9Q9HC56 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC15.05■□□□□ -0
PCDH9Q9HC56 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC15.05■□□□□ -0
PCDH9Q9HC56 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC15.05■□□□□ -0
PCDH9Q9HC56 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC15.05■□□□□ -0
PCDH9Q9HC56 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PCDH9Q9HC56 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PCDH9Q9HC56 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PCDH9Q9HC56 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC15.05■□□□□ -0
PCDH9Q9HC56 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC15.05■□□□□ -0
PCDH9Q9HC56 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ -0
PCDH9Q9HC56 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
PCDH9Q9HC56 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC15.05■□□□□ -0
PCDH9Q9HC56 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC15.05■□□□□ -0
PCDH9Q9HC56 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
PCDH9Q9HC56 CROT-203ENST00000419147 2959 ntTSL 2 BASIC15.05■□□□□ -0
PCDH9Q9HC56 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC15.05■□□□□ -0
PCDH9Q9HC56 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PCDH9Q9HC56 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC15.05■□□□□ -0
PCDH9Q9HC56 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
PCDH9Q9HC56 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC15.05■□□□□ -0
PCDH9Q9HC56 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PCDH9Q9HC56 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
PCDH9Q9HC56 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PCDH9Q9HC56 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PCDH9Q9HC56 AC111170.3-201ENST00000624282 2464 ntBASIC15.04■□□□□ -0
PCDH9Q9HC56 APP-205ENST00000358918 2366 ntTSL 5 BASIC15.04■□□□□ -0
PCDH9Q9HC56 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC15.04■□□□□ -0
PCDH9Q9HC56 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC15.04■□□□□ -0
PCDH9Q9HC56 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
PCDH9Q9HC56 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC15.04■□□□□ -0
PCDH9Q9HC56 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
PCDH9Q9HC56 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC15.04■□□□□ -0
PCDH9Q9HC56 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC15.04■□□□□ -0
PCDH9Q9HC56 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
PCDH9Q9HC56 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PCDH9Q9HC56 CETP-203ENST00000566128 1733 ntTSL 5 BASIC15.04■□□□□ -0
PCDH9Q9HC56 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PCDH9Q9HC56 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC15.04■□□□□ -0
PCDH9Q9HC56 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PCDH9Q9HC56 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC15.04■□□□□ -0
PCDH9Q9HC56 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PCDH9Q9HC56 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
PCDH9Q9HC56 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC15.04■□□□□ -0
PCDH9Q9HC56 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
PCDH9Q9HC56 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
PCDH9Q9HC56 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC15.04■□□□□ -0
PCDH9Q9HC56 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC15.04■□□□□ -0
PCDH9Q9HC56 PFN2-215ENST00000497148 743 ntTSL 4 BASIC15.04■□□□□ -0
PCDH9Q9HC56 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC15.04■□□□□ -0
PCDH9Q9HC56 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC15.04■□□□□ -0
PCDH9Q9HC56 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC15.04■□□□□ -0
PCDH9Q9HC56 AP005482.1-201ENST00000563722 1273 ntBASIC15.04■□□□□ -0
PCDH9Q9HC56 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC15.04■□□□□ -0
PCDH9Q9HC56 RN7SL713P-201ENST00000582127 302 ntBASIC15.04■□□□□ -0
PCDH9Q9HC56 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC15.04■□□□□ -0
PCDH9Q9HC56 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC15.04■□□□□ -0
PCDH9Q9HC56 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC15.04■□□□□ -0
PCDH9Q9HC56 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC15.04■□□□□ -0
PCDH9Q9HC56 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC15.04■□□□□ -0
PCDH9Q9HC56 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
PCDH9Q9HC56 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC15.04■□□□□ -0
PCDH9Q9HC56 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC15.04■□□□□ -0
PCDH9Q9HC56 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PCDH9Q9HC56 AC105206.1-202ENST00000314927 2368 ntBASIC15.04■□□□□ -0
PCDH9Q9HC56 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
PCDH9Q9HC56 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC15.04■□□□□ -0
PCDH9Q9HC56 AL157996.1-201ENST00000624684 2299 ntBASIC15.04■□□□□ -0
PCDH9Q9HC56 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
PCDH9Q9HC56 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
PCDH9Q9HC56 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
PCDH9Q9HC56 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC15.03■□□□□ -0
PCDH9Q9HC56 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
PCDH9Q9HC56 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC15.03■□□□□ -0
PCDH9Q9HC56 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PCDH9Q9HC56 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PCDH9Q9HC56 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
PCDH9Q9HC56 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PCDH9Q9HC56 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
PCDH9Q9HC56 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
PCDH9Q9HC56 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC15.03■□□□□ -0
PCDH9Q9HC56 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PCDH9Q9HC56 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC15.03■□□□□ -0
PCDH9Q9HC56 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms