Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
RSPO3Q9BXY4 APOC4-201ENST00000591600 348 ntTSL 3 BASIC13.29□□□□□ -0.28
RSPO3Q9BXY4 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
RSPO3Q9BXY4 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RSPO3Q9BXY4 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RSPO3Q9BXY4 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RSPO3Q9BXY4 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
RSPO3Q9BXY4 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RSPO3Q9BXY4 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
RSPO3Q9BXY4 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RSPO3Q9BXY4 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RSPO3Q9BXY4 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC13.29□□□□□ -0.28
RSPO3Q9BXY4 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RSPO3Q9BXY4 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RSPO3Q9BXY4 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC13.29□□□□□ -0.28
RSPO3Q9BXY4 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RSPO3Q9BXY4 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RSPO3Q9BXY4 F11R-206ENST00000621309 4770 ntTSL 5 BASIC13.29□□□□□ -0.28
RSPO3Q9BXY4 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC13.29□□□□□ -0.28
RSPO3Q9BXY4 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
RSPO3Q9BXY4 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC13.29□□□□□ -0.28
RSPO3Q9BXY4 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RSPO3Q9BXY4 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RSPO3Q9BXY4 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
RSPO3Q9BXY4 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RSPO3Q9BXY4 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RSPO3Q9BXY4 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RSPO3Q9BXY4 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RSPO3Q9BXY4 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RSPO3Q9BXY4 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RSPO3Q9BXY4 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
RSPO3Q9BXY4 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC13.28□□□□□ -0.28
RSPO3Q9BXY4 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC13.28□□□□□ -0.28
RSPO3Q9BXY4 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RSPO3Q9BXY4 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
RSPO3Q9BXY4 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC13.28□□□□□ -0.28
RSPO3Q9BXY4 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
RSPO3Q9BXY4 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RSPO3Q9BXY4 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC13.28□□□□□ -0.28
RSPO3Q9BXY4 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RSPO3Q9BXY4 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RSPO3Q9BXY4 COPE-202ENST00000349893 948 ntTSL 2 BASIC13.28□□□□□ -0.28
RSPO3Q9BXY4 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC13.28□□□□□ -0.28
RSPO3Q9BXY4 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RSPO3Q9BXY4 TISP43-201ENST00000409793 538 ntTSL 4 BASIC13.28□□□□□ -0.28
RSPO3Q9BXY4 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RSPO3Q9BXY4 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC13.28□□□□□ -0.28
RSPO3Q9BXY4 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC13.28□□□□□ -0.28
RSPO3Q9BXY4 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC13.28□□□□□ -0.28
RSPO3Q9BXY4 NCK2-206ENST00000522586 490 ntTSL 5 BASIC13.28□□□□□ -0.28
RSPO3Q9BXY4 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC13.28□□□□□ -0.28
RSPO3Q9BXY4 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC13.28□□□□□ -0.28
RSPO3Q9BXY4 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC13.28□□□□□ -0.28
RSPO3Q9BXY4 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
RSPO3Q9BXY4 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
RSPO3Q9BXY4 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC13.28□□□□□ -0.28
RSPO3Q9BXY4 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC13.28□□□□□ -0.28
RSPO3Q9BXY4 AC105233.6-201ENST00000642093 218 ntBASIC13.28□□□□□ -0.28
RSPO3Q9BXY4 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RSPO3Q9BXY4 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
RSPO3Q9BXY4 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
RSPO3Q9BXY4 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC13.28□□□□□ -0.28
RSPO3Q9BXY4 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RSPO3Q9BXY4 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC13.28□□□□□ -0.28
RSPO3Q9BXY4 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
RSPO3Q9BXY4 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RSPO3Q9BXY4 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RSPO3Q9BXY4 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RSPO3Q9BXY4 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC13.28□□□□□ -0.28
RSPO3Q9BXY4 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC13.28□□□□□ -0.28
RSPO3Q9BXY4 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RSPO3Q9BXY4 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RSPO3Q9BXY4 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
RSPO3Q9BXY4 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RSPO3Q9BXY4 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
RSPO3Q9BXY4 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RSPO3Q9BXY4 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
RSPO3Q9BXY4 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
RSPO3Q9BXY4 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
RSPO3Q9BXY4 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC13.27□□□□□ -0.28
RSPO3Q9BXY4 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
RSPO3Q9BXY4 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
RSPO3Q9BXY4 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC13.27□□□□□ -0.28
RSPO3Q9BXY4 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.28
RSPO3Q9BXY4 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
RSPO3Q9BXY4 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC13.27□□□□□ -0.28
RSPO3Q9BXY4 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.27□□□□□ -0.28
RSPO3Q9BXY4 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC13.27□□□□□ -0.28
RSPO3Q9BXY4 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC13.27□□□□□ -0.28
RSPO3Q9BXY4 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
RSPO3Q9BXY4 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
RSPO3Q9BXY4 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RSPO3Q9BXY4 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
RSPO3Q9BXY4 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RSPO3Q9BXY4 EDF1-203ENST00000371649 790 ntTSL 2 BASIC13.27□□□□□ -0.29
RSPO3Q9BXY4 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RSPO3Q9BXY4 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RSPO3Q9BXY4 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
RSPO3Q9BXY4 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC13.27□□□□□ -0.29
RSPO3Q9BXY4 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms