Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC16.31■□□□□ 0.2
PTPN18Q99952 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTPN18Q99952 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
PTPN18Q99952 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
PTPN18Q99952 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC16.31■□□□□ 0.2
PTPN18Q99952 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
PTPN18Q99952 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
PTPN18Q99952 AC215219.1-201ENST00000400706 1817 ntBASIC16.31■□□□□ 0.2
PTPN18Q99952 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
PTPN18Q99952 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.31■□□□□ 0.2
PTPN18Q99952 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PTPN18Q99952 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTPN18Q99952 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTPN18Q99952 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
PTPN18Q99952 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTPN18Q99952 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
PTPN18Q99952 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC16.3■□□□□ 0.2
PTPN18Q99952 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PTPN18Q99952 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.3■□□□□ 0.2
PTPN18Q99952 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC16.3■□□□□ 0.2
PTPN18Q99952 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.3■□□□□ 0.2
PTPN18Q99952 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.3■□□□□ 0.2
PTPN18Q99952 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
PTPN18Q99952 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PTPN18Q99952 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTPN18Q99952 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTPN18Q99952 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.3■□□□□ 0.2
PTPN18Q99952 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTPN18Q99952 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
PTPN18Q99952 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
PTPN18Q99952 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
PTPN18Q99952 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTPN18Q99952 ODF3L1-201ENST00000332145 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTPN18Q99952 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PTPN18Q99952 CDK2-203ENST00000440311 1031 ntTSL 2 BASIC16.3■□□□□ 0.2
PTPN18Q99952 NALT1-202ENST00000450304 437 ntTSL 3 BASIC16.3■□□□□ 0.2
PTPN18Q99952 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC16.3■□□□□ 0.2
PTPN18Q99952 AC093300.1-201ENST00000510368 1201 ntBASIC16.3■□□□□ 0.2
PTPN18Q99952 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC16.3■□□□□ 0.2
PTPN18Q99952 AC078814.4-201ENST00000546650 327 ntBASIC16.3■□□□□ 0.2
PTPN18Q99952 AF111169.3-201ENST00000553991 756 ntTSL 5 BASIC16.3■□□□□ 0.2
PTPN18Q99952 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC16.3■□□□□ 0.2
PTPN18Q99952 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC16.3■□□□□ 0.2
PTPN18Q99952 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC16.3■□□□□ 0.2
PTPN18Q99952 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC16.3■□□□□ 0.2
PTPN18Q99952 URAHP-205ENST00000610227 398 ntBASIC16.3■□□□□ 0.2
PTPN18Q99952 GGNBP1-204ENST00000613113 887 ntBASIC16.3■□□□□ 0.2
PTPN18Q99952 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC16.3■□□□□ 0.2
PTPN18Q99952 ESR1-214ENST00000638569 132 ntTSL 5 BASIC16.3■□□□□ 0.2
PTPN18Q99952 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTPN18Q99952 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PTPN18Q99952 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PTPN18Q99952 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
PTPN18Q99952 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTPN18Q99952 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTPN18Q99952 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTPN18Q99952 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.3■□□□□ 0.2
PTPN18Q99952 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
PTPN18Q99952 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PTPN18Q99952 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PTPN18Q99952 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTPN18Q99952 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC16.3■□□□□ 0.2
PTPN18Q99952 TBC1D27-202ENST00000424239 1573 ntBASIC16.3■□□□□ 0.2
PTPN18Q99952 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTPN18Q99952 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PTPN18Q99952 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
PTPN18Q99952 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN18Q99952 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN18Q99952 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN18Q99952 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN18Q99952 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC16.29■□□□□ 0.2
PTPN18Q99952 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN18Q99952 SARS-202ENST00000369923 1882 ntTSL 5 BASIC16.29■□□□□ 0.2
PTPN18Q99952 NNMT-203ENST00000535401 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN18Q99952 AC138035.3-201ENST00000622706 2791 ntBASIC16.29■□□□□ 0.2
PTPN18Q99952 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PTPN18Q99952 WASH7P-201ENST00000488147 1351 ntBASIC16.29■□□□□ 0.2
PTPN18Q99952 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
PTPN18Q99952 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN18Q99952 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN18Q99952 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN18Q99952 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN18Q99952 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN18Q99952 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN18Q99952 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC16.29■□□□□ 0.2
PTPN18Q99952 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN18Q99952 AC114812.1-201ENST00000421868 689 ntTSL 2 BASIC16.29■□□□□ 0.2
PTPN18Q99952 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
PTPN18Q99952 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC16.29■□□□□ 0.2
PTPN18Q99952 MYADML-201ENST00000474610 2147 ntBASIC16.29■□□□□ 0.2
PTPN18Q99952 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC16.29■□□□□ 0.2
PTPN18Q99952 AC113347.2-201ENST00000512350 279 ntBASIC16.29■□□□□ 0.2
PTPN18Q99952 EVX1-AS-203ENST00000519218 554 ntTSL 4 BASIC16.29■□□□□ 0.2
PTPN18Q99952 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC16.29■□□□□ 0.2
PTPN18Q99952 SNX11-210ENST00000582104 1282 ntTSL 2 BASIC16.29■□□□□ 0.2
PTPN18Q99952 AC005777.1-201ENST00000588332 187 ntBASIC16.29■□□□□ 0.2
PTPN18Q99952 TYMSP2-201ENST00000589501 424 ntBASIC16.29■□□□□ 0.2
PTPN18Q99952 AL645608.7-201ENST00000607769 351 ntTSL 4 BASIC16.29■□□□□ 0.2
PTPN18Q99952 AC026336.4-201ENST00000624565 1050 ntBASIC16.29■□□□□ 0.2
PTPN18Q99952 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms