Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 PTN-202ENST00000393083 1599 ntTSL 5 BASIC18.51■□□□□ 0.55
ABCA3Q99758 CLEC10A-206ENST00000576617 1800 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ABCA3Q99758 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ABCA3Q99758 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
ABCA3Q99758 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
ABCA3Q99758 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
ABCA3Q99758 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ABCA3Q99758 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ABCA3Q99758 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ABCA3Q99758 ELFN1-AS1-201ENST00000415399 636 ntTSL 5 BASIC18.51■□□□□ 0.55
ABCA3Q99758 IGHV3-43-201ENST00000434710 434 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
ABCA3Q99758 AC022447.5-201ENST00000504817 392 ntBASIC18.51■□□□□ 0.55
ABCA3Q99758 SLC25A3-206ENST00000547534 556 ntTSL 2 BASIC18.51■□□□□ 0.55
ABCA3Q99758 KCCAT198-201ENST00000549251 549 ntTSL 4 BASIC18.51■□□□□ 0.55
ABCA3Q99758 AL445363.2-201ENST00000554608 837 ntTSL 2 BASIC18.51■□□□□ 0.55
ABCA3Q99758 AC007292.1-201ENST00000594444 746 ntTSL 2 BASIC18.51■□□□□ 0.55
ABCA3Q99758 BX322562.1-201ENST00000617004 561 ntBASIC18.51■□□□□ 0.55
ABCA3Q99758 AL445363.1-201ENST00000623749 952 ntTSL 2 BASIC18.51■□□□□ 0.55
ABCA3Q99758 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ABCA3Q99758 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC18.51■□□□□ 0.55
ABCA3Q99758 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ABCA3Q99758 DAO-208ENST00000551281 1345 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ABCA3Q99758 AC006486.2-201ENST00000624246 2199 ntBASIC18.51■□□□□ 0.55
ABCA3Q99758 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC18.51■□□□□ 0.55
ABCA3Q99758 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
ABCA3Q99758 BPIFB6-201ENST00000349552 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ABCA3Q99758 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
ABCA3Q99758 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ABCA3Q99758 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC18.5■□□□□ 0.55
ABCA3Q99758 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
ABCA3Q99758 RIBC1-202ENST00000375327 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ABCA3Q99758 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
ABCA3Q99758 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
ABCA3Q99758 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC18.5■□□□□ 0.55
ABCA3Q99758 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ABCA3Q99758 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
ABCA3Q99758 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
ABCA3Q99758 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ABCA3Q99758 CSRP2-201ENST00000311083 943 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ABCA3Q99758 IGLV3-9-201ENST00000390316 461 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
ABCA3Q99758 MRPS12-202ENST00000402029 929 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ABCA3Q99758 PPIL3-205ENST00000409449 756 ntTSL 5 BASIC18.5■□□□□ 0.55
ABCA3Q99758 KCNK15-AS1-202ENST00000427303 528 ntTSL 5 BASIC18.5■□□□□ 0.55
ABCA3Q99758 AC007391.1-201ENST00000433893 504 ntTSL 2 BASIC18.5■□□□□ 0.55
ABCA3Q99758 DLGAP4-AS1-203ENST00000439595 1207 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ABCA3Q99758 CDKN2A-AS1-201ENST00000441769 823 ntBASIC18.5■□□□□ 0.55
ABCA3Q99758 AC005009.2-201ENST00000452471 687 ntTSL 3 BASIC18.5■□□□□ 0.55
ABCA3Q99758 IGKV3-11-201ENST00000483158 392 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
ABCA3Q99758 LAMTOR1-208ENST00000545249 965 ntTSL 3 BASIC18.5■□□□□ 0.55
ABCA3Q99758 CSRP2-203ENST00000547435 632 ntTSL 2 BASIC18.5■□□□□ 0.55
ABCA3Q99758 IDH3A-213ENST00000559205 566 ntTSL 4 BASIC18.5■□□□□ 0.55
ABCA3Q99758 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
ABCA3Q99758 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ABCA3Q99758 TTC23L-203ENST00000505624 1353 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
ABCA3Q99758 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
ABCA3Q99758 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ABCA3Q99758 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
ABCA3Q99758 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC18.5■□□□□ 0.55
ABCA3Q99758 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ABCA3Q99758 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
ABCA3Q99758 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC18.49■□□□□ 0.55
ABCA3Q99758 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ABCA3Q99758 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
ABCA3Q99758 AC015818.1-201ENST00000451011 244 ntBASIC18.49■□□□□ 0.55
ABCA3Q99758 SLC25A15P1-201ENST00000456738 342 ntBASIC18.49■□□□□ 0.55
ABCA3Q99758 AC099524.1-203ENST00000565272 756 ntTSL 5 BASIC18.49■□□□□ 0.55
ABCA3Q99758 BOLA3P2-201ENST00000586496 323 ntBASIC18.49■□□□□ 0.55
ABCA3Q99758 ZNF850-201ENST00000589390 523 ntTSL 3 BASIC18.49■□□□□ 0.55
ABCA3Q99758 AL080250.1-203ENST00000607799 747 ntTSL 2 BASIC18.49■□□□□ 0.55
ABCA3Q99758 AC021146.12-201ENST00000608365 477 ntTSL 2 BASIC18.49■□□□□ 0.55
ABCA3Q99758 AC008622.3-201ENST00000621170 600 ntBASIC18.49■□□□□ 0.55
ABCA3Q99758 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ABCA3Q99758 INCA1-201ENST00000355025 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
ABCA3Q99758 HLA-DMB-258ENST00000418107 1397 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
ABCA3Q99758 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC18.49■□□□□ 0.55
ABCA3Q99758 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ABCA3Q99758 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
ABCA3Q99758 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ABCA3Q99758 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
ABCA3Q99758 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ABCA3Q99758 DAP3-201ENST00000343043 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ABCA3Q99758 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ABCA3Q99758 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
ABCA3Q99758 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
ABCA3Q99758 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ABCA3Q99758 RNF181-201ENST00000306368 569 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
ABCA3Q99758 HLA-W-207ENST00000439514 771 ntBASIC18.49■□□□□ 0.55
ABCA3Q99758 RNF181-203ENST00000441634 844 ntAPPRIS ALT1 TSL 2 BASIC18.49■□□□□ 0.55
ABCA3Q99758 GTF2I-203ENST00000443166 979 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ABCA3Q99758 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC18.49■□□□□ 0.55
ABCA3Q99758 FAM86JP-202ENST00000484500 988 ntBASIC18.49■□□□□ 0.55
ABCA3Q99758 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC18.49■□□□□ 0.55
ABCA3Q99758 EEF1AKMT3-203ENST00000548256 561 ntTSL 4 BASIC18.49■□□□□ 0.55
ABCA3Q99758 RN7SL478P-201ENST00000584358 298 ntBASIC18.49■□□□□ 0.55
ABCA3Q99758 BIRC5-211ENST00000592734 386 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ABCA3Q99758 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ABCA3Q99758 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ABCA3Q99758 FAM133B-204ENST00000445716 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ABCA3Q99758 PDHB-210ENST00000485460 1397 ntTSL 2 BASIC18.48■□□□□ 0.55
ABCA3Q99758 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms